G344461


Basic Information

Item Value
gene id G344461
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33213189 ~ 33213899 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU389820
TAATTTTGagtcactggcctaaacacaatagcccataatgtcaatatatattttttaaaattaatacaaaatgaaaagctgaaatgtctcgagtcaacaagtattcaacccctaaTTATGTTCAGCAGTAGAAATTTGCTTAAGAAGTCACATAATAACTTGCATGAACTCACTCTGtgagcaataatagtgtttaacatgatttacgAATGACTACctgatctctgtaccccacacatacaattatctgtacggTCCGTCAGTCGATCAGTGAATTTCCAACatatattcaaccacaaaaaccagggaggttttccaatgcctcgtaaagaagagcacctattggtagatcttttttttttaaagcagacattgattattgctttgagaatggtgaagttattaattactttGGATgtacacccaatcactacaaagatacagacatccttcctaactcagttgccggagaggaaggaaaccgctcagtgatttccccatgaggccaatggtgactaaaacagttacatagtttaatggctgtgttcggagaaaactgaggatggatcaacaacattgtagttactccacaatactgacctaaaagaaggaagcctgtgcagaataaaaatatttcaaaacattaaTCTTGTTTGccataaggcactaaagtaaaactgcaaaaaatgtggcaaagaaatgaactttgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU389820 True 711 lncRNA 0.36 1 33213189 33213899

Neighbor

gene id symbol gene type direction distance location
LOC110522508 ccr6 coding upstream 68020 33140884 ~ 33145169 (+)
LOC110522507 LOC106608145 coding upstream 75679 33119649 ~ 33137510 (+)
LOC110521081 LOC106571614 coding upstream 95127 32965207 ~ 33118062 (+)
LOC118964496 NA coding upstream 300542 32910710 ~ 32912647 (+)
LOC110520987 NA coding upstream 348058 32854057 ~ 32865131 (+)
LOC110522510 LOC106608180 coding downstream 145057 33358956 ~ 33380970 (+)
LOC110522512 LOC106568622 coding downstream 175973 33389872 ~ 33402155 (+)
LOC110522513 LOC106568623 coding downstream 190510 33404409 ~ 33405969 (+)
LOC110522514 LOC106571629 coding downstream 195214 33409113 ~ 33411055 (+)
LOC110521085 LOC100380634 coding downstream 255630 33469529 ~ 33489784 (+)
G344458 NA non-coding upstream 3477 33209496 ~ 33209712 (+)
G344456 NA non-coding upstream 5745 33207243 ~ 33207444 (+)
G344455 NA non-coding upstream 6112 33206801 ~ 33207077 (+)
G344451 NA non-coding upstream 10308 33202675 ~ 33202881 (+)
G344450 NA non-coding upstream 10783 33201897 ~ 33202406 (+)
G344460 NA non-coding downstream 1256 33215155 ~ 33215644 (+)
G344465 NA non-coding downstream 10211 33224110 ~ 33224318 (+)
G344466 NA non-coding downstream 10498 33224397 ~ 33224625 (+)
G344467 NA non-coding downstream 11443 33225342 ~ 33225658 (+)
G344468 NA non-coding downstream 12013 33225912 ~ 33226262 (+)
G343958 NA other upstream 508818 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1426983 31785865 ~ 31786206 (+)
G342571 NA other upstream 1761713 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 1793933 31417955 ~ 31422086 (+)
G342538 NA other upstream 1830440 31381826 ~ 31382749 (+)
G344647 NA other downstream 338228 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 371079 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 1177074 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 1323102 34536950 ~ 34541410 (+)

Expression


Co-expression Network