G344460


Basic Information

Item Value
gene id G344460
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33215155 ~ 33215644 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU389819
CGTCaagatctttaaaaaaaaagcaaCAAAATGAATATGCATTGCCTGAGTTTCATGCAACATATTCTCTACCATTAATGCCTCTGCACATTTCATTTGTTCATGATATGTACTTTCCACTGTTAAAGACTTGTATGAGGAAAACAAACCCAAAGACCTAATAACAAATTCAAAACTGACCATAACCtgaaacaaaacaacagaaaaggacaTAGGACTTGCATAGAATGAATGAATGTAGTTTTGAGATATATCAAGAGTTAACCTGCCCCCATcatagattcagcaccttaataTCAGTCTCCCTCCCTAGACTGGAAAGGATGGAGAGGAAGCCACTGCATTCTGTCCTCTTTGTCATTCCAAGCGAAAAGAGGAAAATATGAATGCTAGTGTTTATAAGACCATTCcgtttttccttttcttttttcaTGAAATAATTCATAGATTAACATTTTAACTGTTGATTTGTTTGATGCTCTCAGTCTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU389819 True 490 lncRNA 0.35 1 33215155 33215644

Neighbor

gene id symbol gene type direction distance location
LOC110522508 ccr6 coding upstream 69986 33140884 ~ 33145169 (+)
LOC110522507 LOC106608145 coding upstream 77645 33119649 ~ 33137510 (+)
LOC110521081 LOC106571614 coding upstream 97093 32965207 ~ 33118062 (+)
LOC118964496 NA coding upstream 302508 32910710 ~ 32912647 (+)
LOC110520987 NA coding upstream 350024 32854057 ~ 32865131 (+)
LOC110522510 LOC106608180 coding downstream 143312 33358956 ~ 33380970 (+)
LOC110522512 LOC106568622 coding downstream 174228 33389872 ~ 33402155 (+)
LOC110522513 LOC106568623 coding downstream 188765 33404409 ~ 33405969 (+)
LOC110522514 LOC106571629 coding downstream 193469 33409113 ~ 33411055 (+)
LOC110521085 LOC100380634 coding downstream 253885 33469529 ~ 33489784 (+)
G344461 NA non-coding upstream 1256 33213189 ~ 33213899 (+)
G344458 NA non-coding upstream 5443 33209496 ~ 33209712 (+)
G344456 NA non-coding upstream 7711 33207243 ~ 33207444 (+)
G344455 NA non-coding upstream 8078 33206801 ~ 33207077 (+)
G344451 NA non-coding upstream 12274 33202675 ~ 33202881 (+)
G344465 NA non-coding downstream 8466 33224110 ~ 33224318 (+)
G344466 NA non-coding downstream 8753 33224397 ~ 33224625 (+)
G344467 NA non-coding downstream 9698 33225342 ~ 33225658 (+)
G344468 NA non-coding downstream 10268 33225912 ~ 33226262 (+)
G344470 LOC106608148 non-coding downstream 16392 33232036 ~ 33232458 (+)
G343958 NA other upstream 510784 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1428949 31785865 ~ 31786206 (+)
G342571 NA other upstream 1763679 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 1795899 31417955 ~ 31422086 (+)
G342538 NA other upstream 1832406 31381826 ~ 31382749 (+)
G344647 NA other downstream 336483 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 369334 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 1175329 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 1321357 34536950 ~ 34541410 (+)

Expression


Co-expression Network