Gene
RNA
| Item | Value |
|---|---|
| gene id | G344467 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 33225342 ~ 33225658 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU389826 | True | 317 | lncRNA | 0.36 | 1 | 33225342 | 33225658 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522508 | ccr6 | coding | upstream | 80173 | 33140884 ~ 33145169 (+) |
| LOC110522507 | LOC106608145 | coding | upstream | 87832 | 33119649 ~ 33137510 (+) |
| LOC110521081 | LOC106571614 | coding | upstream | 107280 | 32965207 ~ 33118062 (+) |
| LOC118964496 | NA | coding | upstream | 312695 | 32910710 ~ 32912647 (+) |
| LOC110520987 | NA | coding | upstream | 360211 | 32854057 ~ 32865131 (+) |
| LOC110522510 | LOC106608180 | coding | downstream | 133298 | 33358956 ~ 33380970 (+) |
| LOC110522512 | LOC106568622 | coding | downstream | 164214 | 33389872 ~ 33402155 (+) |
| LOC110522513 | LOC106568623 | coding | downstream | 178751 | 33404409 ~ 33405969 (+) |
| LOC110522514 | LOC106571629 | coding | downstream | 183455 | 33409113 ~ 33411055 (+) |
| LOC110521085 | LOC100380634 | coding | downstream | 243871 | 33469529 ~ 33489784 (+) |
| G344466 | NA | non-coding | upstream | 717 | 33224397 ~ 33224625 (+) |
| G344465 | NA | non-coding | upstream | 1024 | 33224110 ~ 33224318 (+) |
| G344460 | NA | non-coding | upstream | 9698 | 33215155 ~ 33215644 (+) |
| G344461 | NA | non-coding | upstream | 11443 | 33213189 ~ 33213899 (+) |
| G344458 | NA | non-coding | upstream | 15630 | 33209496 ~ 33209712 (+) |
| G344468 | NA | non-coding | downstream | 254 | 33225912 ~ 33226262 (+) |
| G344470 | LOC106608148 | non-coding | downstream | 6378 | 33232036 ~ 33232458 (+) |
| G344475 | NA | non-coding | downstream | 12302 | 33237960 ~ 33238201 (+) |
| G344478 | LOC106608148 | non-coding | downstream | 14783 | 33240441 ~ 33241181 (+) |
| G344491 | NA | non-coding | downstream | 37906 | 33263564 ~ 33263812 (+) |
| G343958 | NA | other | upstream | 520971 | 32694986 ~ 32704371 (+) |
| G342707 | LOC106608120 | other | upstream | 1439136 | 31785865 ~ 31786206 (+) |
| G342571 | NA | other | upstream | 1773866 | 31451133 ~ 31451476 (+) |
| LOC110522493 | LOC106608104 | other | upstream | 1806086 | 31417955 ~ 31422086 (+) |
| G342538 | NA | other | upstream | 1842593 | 31381826 ~ 31382749 (+) |
| G344647 | NA | other | downstream | 326469 | 33552127 ~ 33554003 (+) |
| LOC110522521 | NA | other | downstream | 359320 | 33584945 ~ 33586386 (+) |
| LOC110522536 | LOC105024319 | other | downstream | 1165315 | 34390869 ~ 34394175 (+) |
| LOC110522530 | LOC106608164 | other | downstream | 1311343 | 34536950 ~ 34541410 (+) |
