G344491


Basic Information

Item Value
gene id G344491
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33263564 ~ 33263812 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU389850
tccctttttcaggaccctgtctttcaaagataattcgtaaaaatcaaaataacttcacagatcttcattgtaaagggtttaaacactgtttcccatgattgtttaatgaaccataaacaattaatgaacatgcacctgtggaacggccgttaagacactaacagcttacagacggtaggcaattaaagggattttctactgactctgaaaaacactgaaagaaagatgcccagggtccctgctcatctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU389850 True 249 lncRNA 0.39 1 33263564 33263812

Neighbor

gene id symbol gene type direction distance location
LOC110522508 ccr6 coding upstream 118395 33140884 ~ 33145169 (+)
LOC110522507 LOC106608145 coding upstream 126054 33119649 ~ 33137510 (+)
LOC110521081 LOC106571614 coding upstream 145502 32965207 ~ 33118062 (+)
LOC118964496 NA coding upstream 350917 32910710 ~ 32912647 (+)
LOC110520987 NA coding upstream 398433 32854057 ~ 32865131 (+)
LOC110522510 LOC106608180 coding downstream 95144 33358956 ~ 33380970 (+)
LOC110522512 LOC106568622 coding downstream 126060 33389872 ~ 33402155 (+)
LOC110522513 LOC106568623 coding downstream 140597 33404409 ~ 33405969 (+)
LOC110522514 LOC106571629 coding downstream 145301 33409113 ~ 33411055 (+)
LOC110521085 LOC100380634 coding downstream 205717 33469529 ~ 33489784 (+)
G344478 LOC106608148 non-coding upstream 22383 33240441 ~ 33241181 (+)
G344475 NA non-coding upstream 25363 33237960 ~ 33238201 (+)
G344470 LOC106608148 non-coding upstream 31106 33232036 ~ 33232458 (+)
G344468 NA non-coding upstream 37302 33225912 ~ 33226262 (+)
G344467 NA non-coding upstream 37906 33225342 ~ 33225658 (+)
G344494 NA non-coding downstream 3265 33267077 ~ 33267317 (+)
G344570 NA non-coding downstream 120775 33384587 ~ 33384812 (+)
G344571 NA non-coding downstream 121093 33384905 ~ 33385222 (+)
G344572 NA non-coding downstream 122095 33385907 ~ 33386112 (+)
G344578 NA non-coding downstream 144680 33408492 ~ 33408895 (+)
G343958 NA other upstream 559193 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1477358 31785865 ~ 31786206 (+)
G342571 NA other upstream 1812088 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 1844308 31417955 ~ 31422086 (+)
G342538 NA other upstream 1880815 31381826 ~ 31382749 (+)
G344647 NA other downstream 288315 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 321166 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 1127161 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 1273189 34536950 ~ 34541410 (+)

Expression


Co-expression Network