G344494


Basic Information

Item Value
gene id G344494
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33267077 ~ 33267317 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU389853
caaataaagaacagataccttatttacataagtattcagaccctttgcaatgagactcaaaattgagctcaggtgcatcctgtttccattgatcatccttgagatgtttcttcaacttgattggagtccacctgtggtaaattcaattgattggacatgattttgaaaggcacacacctgtctatataagttcccacacttgacagtgcaggtcagagaaaaaaccaagccatgtggtcgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU389853 True 241 lncRNA 0.40 1 33267077 33267317

Neighbor

gene id symbol gene type direction distance location
LOC110522508 ccr6 coding upstream 121908 33140884 ~ 33145169 (+)
LOC110522507 LOC106608145 coding upstream 129567 33119649 ~ 33137510 (+)
LOC110521081 LOC106571614 coding upstream 149015 32965207 ~ 33118062 (+)
LOC118964496 NA coding upstream 354430 32910710 ~ 32912647 (+)
LOC110520987 NA coding upstream 401946 32854057 ~ 32865131 (+)
LOC110522510 LOC106608180 coding downstream 91639 33358956 ~ 33380970 (+)
LOC110522512 LOC106568622 coding downstream 122555 33389872 ~ 33402155 (+)
LOC110522513 LOC106568623 coding downstream 137092 33404409 ~ 33405969 (+)
LOC110522514 LOC106571629 coding downstream 141796 33409113 ~ 33411055 (+)
LOC110521085 LOC100380634 coding downstream 202212 33469529 ~ 33489784 (+)
G344491 NA non-coding upstream 3265 33263564 ~ 33263812 (+)
G344478 LOC106608148 non-coding upstream 25896 33240441 ~ 33241181 (+)
G344475 NA non-coding upstream 28876 33237960 ~ 33238201 (+)
G344470 LOC106608148 non-coding upstream 34619 33232036 ~ 33232458 (+)
G344468 NA non-coding upstream 40815 33225912 ~ 33226262 (+)
G344570 NA non-coding downstream 117270 33384587 ~ 33384812 (+)
G344571 NA non-coding downstream 117588 33384905 ~ 33385222 (+)
G344572 NA non-coding downstream 118590 33385907 ~ 33386112 (+)
G344578 NA non-coding downstream 141175 33408492 ~ 33408895 (+)
G344582 NA non-coding downstream 147090 33414407 ~ 33414607 (+)
G343958 NA other upstream 562706 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1480871 31785865 ~ 31786206 (+)
G342571 NA other upstream 1815601 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 1847821 31417955 ~ 31422086 (+)
G342538 NA other upstream 1884328 31381826 ~ 31382749 (+)
G344647 NA other downstream 284810 33552127 ~ 33554003 (+)
LOC110522521 NA other downstream 317661 33584945 ~ 33586386 (+)
LOC110522536 LOC105024319 other downstream 1123656 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 1269684 34536950 ~ 34541410 (+)

Expression


Co-expression Network