G344571


Basic Information

Item Value
gene id G344571
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33384905 ~ 33385222 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU389935
gatgcatacaaagctctccctcaccctccatttggcaaatctgaccataattctatcctcctgattccttcaagcaggaagcaccagtgattagatcaataaaaaagtggtcagatgaagcaaatgctaagctacaggactgttttgctagcacagactggaatatgttccaggattcctccgatggcattgaggagtacaccacatctgtcattggcaaaaggaacacctatgtgagaatgtgattcattgacaacagctcagcgttcaacaccacagtgccctcaaagctcatcaataagctaaggaccctgggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU389935 True 318 lncRNA 0.45 1 33384905 33385222

Neighbor

gene id symbol gene type direction distance location
LOC110522510 LOC106608180 coding upstream 3935 33358956 ~ 33380970 (+)
LOC110522508 ccr6 coding upstream 239736 33140884 ~ 33145169 (+)
LOC110522507 LOC106608145 coding upstream 247395 33119649 ~ 33137510 (+)
LOC110521081 LOC106571614 coding upstream 266843 32965207 ~ 33118062 (+)
LOC118964496 NA coding upstream 472258 32910710 ~ 32912647 (+)
LOC110522512 LOC106568622 coding downstream 4650 33389872 ~ 33402155 (+)
LOC110522513 LOC106568623 coding downstream 19187 33404409 ~ 33405969 (+)
LOC110522514 LOC106571629 coding downstream 23891 33409113 ~ 33411055 (+)
LOC110521085 LOC100380634 coding downstream 84307 33469529 ~ 33489784 (+)
LOC110522521 NA coding downstream 199723 33584945 ~ 33586386 (+)
G344570 NA non-coding upstream 93 33384587 ~ 33384812 (+)
G344494 NA non-coding upstream 117588 33267077 ~ 33267317 (+)
G344491 NA non-coding upstream 121093 33263564 ~ 33263812 (+)
G344478 LOC106608148 non-coding upstream 143724 33240441 ~ 33241181 (+)
G344475 NA non-coding upstream 146704 33237960 ~ 33238201 (+)
G344572 NA non-coding downstream 685 33385907 ~ 33386112 (+)
G344578 NA non-coding downstream 23270 33408492 ~ 33408895 (+)
G344582 NA non-coding downstream 29185 33414407 ~ 33414607 (+)
G344583 NA non-coding downstream 30373 33415595 ~ 33415963 (+)
G344585 NA non-coding downstream 33469 33418691 ~ 33418910 (+)
G343958 NA other upstream 680534 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1598699 31785865 ~ 31786206 (+)
G342571 NA other upstream 1933429 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 1965649 31417955 ~ 31422086 (+)
G342538 NA other upstream 2002156 31381826 ~ 31382749 (+)
G344647 NA other downstream 166905 33552127 ~ 33554003 (+)
LOC110522536 LOC105024319 other downstream 1005751 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 1151779 34536950 ~ 34541410 (+)

Expression


Co-expression Network