G344572


Basic Information

Item Value
gene id G344572
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33385907 ~ 33386112 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU389936
ctataccaggctgtgtcagaggaaggctctaaaaattggcaaagactccagccaccctagtcatagactgttctctctgctactacttggcaagcggtaccggagcaccaagtctaggtccaagagtcttctaaacagcttctacccccaagccataagactcctgaacacctaatcaaatggctacccagactatttgcatcccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU389936 True 206 lncRNA 0.49 1 33385907 33386112

Neighbor

gene id symbol gene type direction distance location
LOC110522510 LOC106608180 coding upstream 4937 33358956 ~ 33380970 (+)
LOC110522508 ccr6 coding upstream 240738 33140884 ~ 33145169 (+)
LOC110522507 LOC106608145 coding upstream 248397 33119649 ~ 33137510 (+)
LOC110521081 LOC106571614 coding upstream 267845 32965207 ~ 33118062 (+)
LOC118964496 NA coding upstream 473260 32910710 ~ 32912647 (+)
LOC110522512 LOC106568622 coding downstream 3760 33389872 ~ 33402155 (+)
LOC110522513 LOC106568623 coding downstream 18297 33404409 ~ 33405969 (+)
LOC110522514 LOC106571629 coding downstream 23001 33409113 ~ 33411055 (+)
LOC110521085 LOC100380634 coding downstream 83417 33469529 ~ 33489784 (+)
LOC110522521 NA coding downstream 198833 33584945 ~ 33586386 (+)
G344571 NA non-coding upstream 685 33384905 ~ 33385222 (+)
G344570 NA non-coding upstream 1095 33384587 ~ 33384812 (+)
G344494 NA non-coding upstream 118590 33267077 ~ 33267317 (+)
G344491 NA non-coding upstream 122095 33263564 ~ 33263812 (+)
G344478 LOC106608148 non-coding upstream 144726 33240441 ~ 33241181 (+)
G344578 NA non-coding downstream 22380 33408492 ~ 33408895 (+)
G344582 NA non-coding downstream 28295 33414407 ~ 33414607 (+)
G344583 NA non-coding downstream 29483 33415595 ~ 33415963 (+)
G344585 NA non-coding downstream 32579 33418691 ~ 33418910 (+)
G344587 NA non-coding downstream 35032 33421144 ~ 33421376 (+)
G343958 NA other upstream 681536 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1599701 31785865 ~ 31786206 (+)
G342571 NA other upstream 1934431 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 1966651 31417955 ~ 31422086 (+)
G342538 NA other upstream 2003158 31381826 ~ 31382749 (+)
G344647 NA other downstream 166015 33552127 ~ 33554003 (+)
LOC110522536 LOC105024319 other downstream 1004861 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 1150889 34536950 ~ 34541410 (+)

Expression


Co-expression Network