G344585


Basic Information

Item Value
gene id G344585
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33418691 ~ 33418910 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU389949
CTGATGGAAAGAACTGAGCATTGATATTGTCTGTAGTTTATTGTATTACATTGCATTAAATCTTGGTACATAGTAACAGAACACTGAAAGTAAAGAAACTTGATGCTATCCCTGCCTGTTGATCTGTGATTTAAACTGTTTGCTCTGCTCTGTCCAGCGCACTTTCTCTCCACTAAGCCCATCAATGAGTGCTGACGCTGCCACCATTTTATTCCTGCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU389949 True 220 lncRNA 0.40 1 33418691 33418910

Neighbor

gene id symbol gene type direction distance location
LOC110522514 LOC106571629 coding upstream 7636 33409113 ~ 33411055 (+)
LOC110522513 LOC106568623 coding upstream 12722 33404409 ~ 33405969 (+)
LOC110522512 LOC106568622 coding upstream 16536 33389872 ~ 33402155 (+)
LOC110522510 LOC106608180 coding upstream 37721 33358956 ~ 33380970 (+)
LOC110522508 ccr6 coding upstream 273522 33140884 ~ 33145169 (+)
LOC110521085 LOC100380634 coding downstream 50619 33469529 ~ 33489784 (+)
LOC110522521 NA coding downstream 166035 33584945 ~ 33586386 (+)
LOC110522523 LOC106608181 coding downstream 214280 33633190 ~ 33636494 (+)
LOC110522524 LOC106608181 coding downstream 226318 33645228 ~ 33647432 (+)
LOC110522526 LOC106608180 coding downstream 235150 33654060 ~ 33656575 (+)
G344583 NA non-coding upstream 2728 33415595 ~ 33415963 (+)
G344582 NA non-coding upstream 4084 33414407 ~ 33414607 (+)
G344578 NA non-coding upstream 9796 33408492 ~ 33408895 (+)
G344572 NA non-coding upstream 32579 33385907 ~ 33386112 (+)
G344571 NA non-coding upstream 33469 33384905 ~ 33385222 (+)
G344587 NA non-coding downstream 2234 33421144 ~ 33421376 (+)
G344588 NA non-coding downstream 3393 33422303 ~ 33422613 (+)
G344589 NA non-coding downstream 3852 33422762 ~ 33423081 (+)
G344605 NA non-coding downstream 20625 33439535 ~ 33439817 (+)
G344606 NA non-coding downstream 23953 33442863 ~ 33443085 (+)
G343958 NA other upstream 714320 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1632485 31785865 ~ 31786206 (+)
G342571 NA other upstream 1967215 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 1999435 31417955 ~ 31422086 (+)
G342538 NA other upstream 2035942 31381826 ~ 31382749 (+)
G344647 NA other downstream 133217 33552127 ~ 33554003 (+)
LOC110522536 LOC105024319 other downstream 972063 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 1118091 34536950 ~ 34541410 (+)

Expression


Co-expression Network