G344588


Basic Information

Item Value
gene id G344588
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33422303 ~ 33422613 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU389952
CCTCTCTATGGAACTACTCTGGAAAATACTATCAATGGGACACTACATAACAAACTCCTGAATTCTTGAGTGACAATCATGGAGGTGATGTTTTTATGTTTCCGGTATTACTAAATCATACCGGAGAGAAGCAAAGAACCACGTGCAGGTTCTTCCTGGCTCGGGAGATAAAGTAGTCGTACAGGTTGTCGAAGGTGGGCGGGACGCGAGGCAACTCTTTCTTCATTACACCAATGAGGTTCTGAGTGATCTCGTCCAGCTCATCACGAGCAAACAGGTTGGACACCTGCACACAACAAGCATAATAATTA

Function

NR:

description
PREDICTED: dynein heavy chain 8, axonemal isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU389952 True 311 lncRNA 0.45 1 33422303 33422613

Neighbor

gene id symbol gene type direction distance location
LOC110522514 LOC106571629 coding upstream 11248 33409113 ~ 33411055 (+)
LOC110522513 LOC106568623 coding upstream 16334 33404409 ~ 33405969 (+)
LOC110522512 LOC106568622 coding upstream 20148 33389872 ~ 33402155 (+)
LOC110522510 LOC106608180 coding upstream 41333 33358956 ~ 33380970 (+)
LOC110522508 ccr6 coding upstream 277134 33140884 ~ 33145169 (+)
LOC110521085 LOC100380634 coding downstream 46916 33469529 ~ 33489784 (+)
LOC110522521 NA coding downstream 162332 33584945 ~ 33586386 (+)
LOC110522523 LOC106608181 coding downstream 210577 33633190 ~ 33636494 (+)
LOC110522524 LOC106608181 coding downstream 222615 33645228 ~ 33647432 (+)
LOC110522526 LOC106608180 coding downstream 231447 33654060 ~ 33656575 (+)
G344587 NA non-coding upstream 927 33421144 ~ 33421376 (+)
G344585 NA non-coding upstream 3393 33418691 ~ 33418910 (+)
G344583 NA non-coding upstream 6340 33415595 ~ 33415963 (+)
G344582 NA non-coding upstream 7696 33414407 ~ 33414607 (+)
G344578 NA non-coding upstream 13408 33408492 ~ 33408895 (+)
G344589 NA non-coding downstream 149 33422762 ~ 33423081 (+)
G344605 NA non-coding downstream 16922 33439535 ~ 33439817 (+)
G344606 NA non-coding downstream 20250 33442863 ~ 33443085 (+)
G344636 LOC106608185 non-coding downstream 88961 33511574 ~ 33512323 (+)
G344638 LOC106608185 non-coding downstream 93867 33516480 ~ 33519692 (+)
G343958 NA other upstream 717932 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1636097 31785865 ~ 31786206 (+)
G342571 NA other upstream 1970827 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 2003047 31417955 ~ 31422086 (+)
G342538 NA other upstream 2039554 31381826 ~ 31382749 (+)
G344647 NA other downstream 129514 33552127 ~ 33554003 (+)
LOC110522536 LOC105024319 other downstream 968360 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 1114388 34536950 ~ 34541410 (+)

Expression


Co-expression Network