Gene
RNA
| Item | Value |
|---|---|
| gene id | G344605 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 33439535 ~ 33439817 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU389977 | True | 283 | lncRNA | 0.35 | 1 | 33439535 | 33439817 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522514 | LOC106571629 | coding | upstream | 28480 | 33409113 ~ 33411055 (+) |
| LOC110522513 | LOC106568623 | coding | upstream | 33566 | 33404409 ~ 33405969 (+) |
| LOC110522512 | LOC106568622 | coding | upstream | 37380 | 33389872 ~ 33402155 (+) |
| LOC110522510 | LOC106608180 | coding | upstream | 58565 | 33358956 ~ 33380970 (+) |
| LOC110522508 | ccr6 | coding | upstream | 294366 | 33140884 ~ 33145169 (+) |
| LOC110521085 | LOC100380634 | coding | downstream | 29712 | 33469529 ~ 33489784 (+) |
| LOC110522521 | NA | coding | downstream | 145128 | 33584945 ~ 33586386 (+) |
| LOC110522523 | LOC106608181 | coding | downstream | 193373 | 33633190 ~ 33636494 (+) |
| LOC110522524 | LOC106608181 | coding | downstream | 205411 | 33645228 ~ 33647432 (+) |
| LOC110522526 | LOC106608180 | coding | downstream | 214243 | 33654060 ~ 33656575 (+) |
| G344589 | NA | non-coding | upstream | 16454 | 33422762 ~ 33423081 (+) |
| G344588 | NA | non-coding | upstream | 16922 | 33422303 ~ 33422613 (+) |
| G344587 | NA | non-coding | upstream | 18159 | 33421144 ~ 33421376 (+) |
| G344585 | NA | non-coding | upstream | 20625 | 33418691 ~ 33418910 (+) |
| G344583 | NA | non-coding | upstream | 23572 | 33415595 ~ 33415963 (+) |
| G344606 | NA | non-coding | downstream | 3046 | 33442863 ~ 33443085 (+) |
| G344636 | LOC106608185 | non-coding | downstream | 71757 | 33511574 ~ 33512323 (+) |
| G344638 | LOC106608185 | non-coding | downstream | 76663 | 33516480 ~ 33519692 (+) |
| G344641 | NA | non-coding | downstream | 85524 | 33525341 ~ 33527572 (+) |
| G344650 | NA | non-coding | downstream | 94499 | 33534316 ~ 33536262 (+) |
| G343958 | NA | other | upstream | 735164 | 32694986 ~ 32704371 (+) |
| G342707 | LOC106608120 | other | upstream | 1653329 | 31785865 ~ 31786206 (+) |
| G342571 | NA | other | upstream | 1988059 | 31451133 ~ 31451476 (+) |
| LOC110522493 | LOC106608104 | other | upstream | 2020279 | 31417955 ~ 31422086 (+) |
| G342538 | NA | other | upstream | 2056786 | 31381826 ~ 31382749 (+) |
| G344647 | NA | other | downstream | 112310 | 33552127 ~ 33554003 (+) |
| LOC110522536 | LOC105024319 | other | downstream | 951156 | 34390869 ~ 34394175 (+) |
| LOC110522530 | LOC106608164 | other | downstream | 1097184 | 34536950 ~ 34541410 (+) |
