G344638 (LOC106608185)


Basic Information

Item Value
gene id G344638
gene name LOC106608185
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33516480 ~ 33519692 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU390015
GAGAGCTCATTGGTGTGATCTGAGGGAGAGTTCCGCTCTGTTCTCAAGAAAGGCCGGTCCTCACTGGGGCATGGCACCGAGATGATCATATCATTGTTCTCCATGTTCTGCTGGCCTATGGTgggctgcagCAAGTTGGCCCACATCTGTACGGCTAGTTTGTCTGTGTGTAATGCACCCGCTCTGGGGGCAGCGCTAATAAAGGAGGCTGGGTCTGCTGTGATGAAGGGGACATCCTGCAGTAGGACGGTGAAGTCATCTTTGTTGCTGTACCACTGCTTCTCCACCAGGTGTCCGTCAAGGGACTCCTACTGACCACCATGAAATAGAGTTAGGTAAAAATGAACTATGTACAATACACCTATTTAACTGAAATGTTTGTCCACTAAATCCACAGCCAGGAGAGATTAGTGTACAACTTTATTTTTCACTTGTATAGTCCCCTGTGCTACAACCTCTTCTGTTCATATGTTGTTTATTCTATTTTGCAGTATGTCCTGTAAGGAGTTTTTATGATACCATTTTTTTGGTTGAAATCAGACAATAAAATGCAATCTaatcttatcttatcttatttATATGTGGACAAGAGTATAAACAGGACATAGGTCAGGGACCATCAACCAGATTCACCCGCGGGACAATTTTTTTATAAGAGGATGGTCGGTGGGCCAGAACATcgttacaaatcatttgtagactgcaatttGATTGCAAGAAccacaaacagatataatatttgacaaaaacatgataatttcaaaccttgcttacatttgtatatgatcacgtgtctctctattatgcgtgggaatacttgggaaaagatttccaaaattaaattAACTGGTAGGTTTTTTTTGTCCAAacaatttgggggggggggggataaaaccACAGTGGGGCCAAATTCGACCCTGACATAGATGTTGGGGAGATAGGGGAGATCACATTGATGTAAGTTATTGATGTAAGACATTGATGATGTAAGACTGGTGATGTAAGACATTGATAATGTAAGACATAGACATTGATGATGTAAGACATGAATAATGTAAGACATTGATGATGTAAGACATGAATAATGTAAGACATTGATGATGTAAGACATTGATGATGTAAGACTGATGATGTAAAACATGTGTAAGACATTGACGATGTAAGACATTAATAATGTAAGACATTGACGATGTAAGACATTAATAATGTAAGACATTGATGATGTAAGACATGAATAATGTAAGACATTGATGATGTAAGACATTAATAATGTAAGACATTGATGATGTAAGACATTGATGATGTAAGACTGATGATGTAAAACATGTGTAAGACATTGACGATGTAAGACATTGATGATGTAAGACATTGATGATGTAAGACATGAATAATGTAAGACATTGATGATGTAAGACATGAATAATGTAAGACATTGATGATGTAAGACATGAATAATGTAAGACATTGATGATGTAAGACATGAATAATGTAAGACATTGATGATGTAAGACATGTGTAAGACATTGACGATGTAAGAAATTGATGATGTAAGACATGAATAATGTAAGACATTGATGATGTAAGACATGAATAATGTAAGACATTGATGATGTAAGACATGAATAATGTAAGACATTGATGATGTAAGACAGATGTAAGAAATTGATGGTGTACGACAT

Function

NR:

description
phospholipase B1, membrane-associated-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU390015 True 1679 lncRNA 0.37 4 33516480 33519692

Neighbor

gene id symbol gene type direction distance location
LOC110521085 LOC100380634 coding upstream 40709 33469529 ~ 33489784 (+)
LOC110522514 LOC106571629 coding upstream 105425 33409113 ~ 33411055 (+)
LOC110522513 LOC106568623 coding upstream 110511 33404409 ~ 33405969 (+)
LOC110522512 LOC106568622 coding upstream 114325 33389872 ~ 33402155 (+)
LOC110522510 LOC106608180 coding upstream 135510 33358956 ~ 33380970 (+)
LOC110522521 NA coding downstream 65253 33584945 ~ 33586386 (+)
LOC110522523 LOC106608181 coding downstream 113498 33633190 ~ 33636494 (+)
LOC110522524 LOC106608181 coding downstream 125536 33645228 ~ 33647432 (+)
LOC110522526 LOC106608180 coding downstream 134368 33654060 ~ 33656575 (+)
LOC110522527 LOC106608180 coding downstream 149480 33669172 ~ 33673911 (+)
G344636 LOC106608185 non-coding upstream 4157 33511574 ~ 33512323 (+)
G344606 NA non-coding upstream 73395 33442863 ~ 33443085 (+)
G344605 NA non-coding upstream 76663 33439535 ~ 33439817 (+)
G344589 NA non-coding upstream 93399 33422762 ~ 33423081 (+)
G344588 NA non-coding upstream 93867 33422303 ~ 33422613 (+)
G344641 NA non-coding downstream 5649 33525341 ~ 33527572 (+)
G344650 NA non-coding downstream 14624 33534316 ~ 33536262 (+)
G344659 NA non-coding downstream 23137 33542829 ~ 33543028 (+)
G344647 NA non-coding downstream 32435 33552127 ~ 33554003 (+)
G344670 NA non-coding downstream 73586 33593278 ~ 33596009 (+)
G343958 NA other upstream 812109 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1730274 31785865 ~ 31786206 (+)
G342571 NA other upstream 2065004 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 2097224 31417955 ~ 31422086 (+)
LOC110522536 LOC105024319 other downstream 871281 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 1017309 34536950 ~ 34541410 (+)
LOC110522546 LOC106608201 other downstream 1300750 34807607 ~ 34831281 (+)

Expression


Co-expression Network