G344647


Basic Information

Item Value
gene id G344647
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33552127 ~ 33554003 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU390025
CCTCTAATCCAGTTTAATCATCCTCAGCAAAAAGGCCAAATACAATAAGAGAAAACAAagttattttttatacatttaactaaatatgcagcgCTATGCTAGTGTGTAAGTAAATCAAAACCATATGGTTAAATACAATTTCTTTTAAGATACAGAAAGATATTAATTTCTTCCATTAGCACTCGCGAGAACAGATTGCAAAATATCAAAATAAAACCAGCCACAACGGTACgctccttttttgttgttgaccactacacatcactccctccatccttcaAATCATCCCTCGCACCAGAAGGGGACCAGTGAGAGTCgaaggaagcagaggagagggggatggagtgaAGAATGAGATGAGCATTGGGACCAGCACAGTCAAGTAGTGTGACTAGGGTAGTAGGAGAAAATATGGAACAGACTAGCAGTATACTACTTAGAATGAACCAACGTATCAGGCATGCATTCTAAGTGGTATTCTATTATGGCCATATGAACAGAGCCATGGTTCAATAGTCCAAGGAGTCAGGGATTTTGTATGTACAGAAGAGGGAGTAGAGTGCATTACAAAACAAAGAGCAGGAACAGCATCACTCATTCAAAGGGCAGCAGGCAGAGAAGAGCTTCTGCTTGTGTGTCTCCAGTCCATTTGTTCAGACTGATCCAACagaggagcggaggaggaggTTGGCTGCAGTACAAAGGTTAGTGGTCTGGTTTGGATTCAAACCACTCTGGCAGAGACTCGTAGGAACAAACACGGCCACAACAACTGACCCAGGACCTGGGGAACAATGTCCTCACTCAACACACAAGCCAATTCAATCCAATGCCATGCAGAGCCATTGGGCAAGGAAAAGAGAAAATAAGGTGGGGGAGTTAAAGGTCGATATCCCACCCTCCTACAACCTGAGGAGTGGTCTAGGGACAGACAGATCTATGTTCCGTTCCTTAGTGACCATTGACATAGTGAAAACCTGCTGACAAAGACAACTAAGGAGCcgGGTCCTTGTTGAATCTGAAGACTGGGCGAGTTAAGGCTGTGAAAATGAACATGCGATAGTGACAGTGTGGCTCCAGAGGTTGCCGTGGTGACAGTGTCCAAGTCAGAGTCCAAACTGTCAAGACTAACAGGAGTGGATCAACAATACTCAGATCCAGAATGTGTGGAGACGGGCGGTCAATGGGAGCAACTCAGGAGCACTCTTCTCCAATGCGCTGGCATGAGCGGCCCACCTTGCGGTCCAGCTTCACCATCTTGAGGACGGCCTCCTCGCGCCCACGCCCCAGGTGGTCGAACAGGCAGTCGTGCTGCTCAGTACTTACCGCAGCGACAGGAGCCCAGTTCCTGCTGTACCAGCTCCAGTTTGGTTTGGCAGCGATAGCAGCGCCGGCGGTTTTTCTGCTTGGGTCCTGGGCTAGGCTCCTCGCTAACCGCCTCCCCCTCCTCAGAGTCCCCCCGTGCCCGTTTCTCCGGTGACGCCTCG
>TU390026
CCTCTAATCCAGTTTAATCATCCTCAGCAAAAAGGCCAAATACAATAAGAGAAAACAAagttattttttatacatttaactaaatatgcagcgCTATGCTAGTGTGTAAGTAAATCAAAACCATATGGTTAAATACAATTTCTTTTAAGATACAGAAAGATATTAATTTCTTCCATTAGCACTCGCGAGAACAGATTGCAAAATATCAAAATAAAACCAGCCACAACGGTACgctccttttttgttgttgaccactacacatcactccctccatccttcaAATCATCCCTCGCACCAGAAGGGGACCAGTGAGAGTCgaaggaagcagaggagagggggatggagtgaAGAATGAGATGAGCATTGGGACCAGCACAGTCAAGTAGTGTGACTAGGGTAGTAGGAGAAAATATGGAACAGACTAGCAGTATACTACTTAGAATGAACCAACGTATCAGGCATGCATTCTAAGTGGTATTCTATTATGGCCATATGAACAGAGCCATGGTTCAATAGTCCAAGGAGTCAGGGATTTTGTATGTACAGAAGAGGGAGTAGAGTGCATTACAAAACAAAGAGCAGGAACAGCATCACTCATTCAAAGGGCAGCAGGCAGAGAAGAGCTTCTGCTTGTGTGTCTCCAGTCCATTTGTTCAGACTGATCCAACagaggagcggaggaggaggTTGGCTGCAGTACAAAGGTTAGTGGTCTGGTTTGGATTCAAACCACTCTGGCAGAGACTCGTAGGAACAAACACGGCCACAACAACTGACCCAGGACCTGGGGAACAATGTCCTCACTCAACACACAAGCCAATTCAATCCAATGCCATGCAGAGCCATTGGGCAAGGAAAAGAGAAAATAAGGTGGGGGAGTTAAAGGTCGATATCCCACCCTCCTACAACCTGAGGAGTGGTCTAGGGACAGACAGATCTATGTTCCGTTCCTTAGTGACCATTGACATAGTGAAAACCTGCTGACAAAGACAACTAAGGAGCcgGGTCCTTGTTGAATCTGAAGACTGGGCGAGTTAAGGCTGTGAAAATGAACATGCGATAGTGACAGTGTGGCTCCAGAGGTTGCCGTGGTGACAGTGTCCAAGTCAGAGTCCAAACTGTCAAGACTAACAGGAGTGGATCAACAATACTCAGATCCAGAATGTGTGGAGACGGGCGGTCAATGGGAGCAACTCAGGAGCACTCTTCTCCAATGCGCTGGCATGAGCGGCCCACCTTGCGGTCCAGCTTCACCATCTTGAGGACGGCCTCCTCGCGCCCACGCCCCAGGTGGTCGAACAGGCAGTCGTGCTGCTCAGGTAGACGGTGCAGCATGCAGAACAC

Function

NR:

description
PREDICTED: AN1-type zinc finger protein 3-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU390025 False 1487 TUCP 0.49 4 33552127 33554003
TU390026 True 1344 lncRNA 0.47 3 33552127 33553726

Neighbor

gene id symbol gene type direction distance location
LOC110521085 LOC100380634 coding upstream 76356 33469529 ~ 33489784 (+)
LOC110522514 LOC106571629 coding upstream 141072 33409113 ~ 33411055 (+)
LOC110522513 LOC106568623 coding upstream 146158 33404409 ~ 33405969 (+)
LOC110522512 LOC106568622 coding upstream 149972 33389872 ~ 33402155 (+)
LOC110522510 LOC106608180 coding upstream 171157 33358956 ~ 33380970 (+)
LOC110522521 NA coding downstream 31219 33584945 ~ 33586386 (+)
LOC110522523 LOC106608181 coding downstream 79464 33633190 ~ 33636494 (+)
LOC110522524 LOC106608181 coding downstream 91502 33645228 ~ 33647432 (+)
LOC110522526 LOC106608180 coding downstream 100334 33654060 ~ 33656575 (+)
LOC110522527 LOC106608180 coding downstream 115446 33669172 ~ 33673911 (+)
G344659 NA non-coding upstream 9099 33542829 ~ 33543028 (+)
G344650 NA non-coding upstream 15865 33534316 ~ 33536262 (+)
G344641 NA non-coding upstream 24555 33525341 ~ 33527572 (+)
G344638 LOC106608185 non-coding upstream 32435 33516480 ~ 33519692 (+)
G344636 LOC106608185 non-coding upstream 39804 33511574 ~ 33512323 (+)
G344670 NA non-coding downstream 39552 33593278 ~ 33596009 (+)
G344673 NA non-coding downstream 46347 33600073 ~ 33600597 (+)
G344679 LOC100194703 non-coding downstream 57790 33611516 ~ 33611823 (+)
G344685 NA non-coding downstream 64215 33617941 ~ 33618240 (+)
G344692 NA non-coding downstream 75943 33629669 ~ 33630011 (+)
G343958 NA other upstream 847756 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1765921 31785865 ~ 31786206 (+)
G342571 NA other upstream 2100651 31451133 ~ 31451476 (+)
LOC110522493 LOC106608104 other upstream 2132871 31417955 ~ 31422086 (+)
LOC110522536 LOC105024319 other downstream 837247 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 983275 34536950 ~ 34541410 (+)
LOC110522546 LOC106608201 other downstream 1266716 34807607 ~ 34831281 (+)
G346334 NA other downstream 1520213 35073939 ~ 35074338 (+)

Expression

G344647 Expression in all Baseline Samples

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G344647 Expression in each Bioproject

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G344647 Expression in each Sample
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Co-expression Network