G344679 (LOC100194703)


Basic Information

Item Value
gene id G344679
gene name LOC100194703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33611516 ~ 33611823 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU390059
AAACTATTAGAAAAAAATGTGGTCAATTAACTTTTGGGCCACaccctgactgatggcagcccattcttgcataatcaatgcttggagtttgtcagaatttgtgggtttttgtttgtccacccgcctcttgaggattgaccacaaattctcaatgggattaaggtctggggagattCTTGGCcgtggacccaaaatatcgatgttttgttccccgagccacttagttatcacttttgccttatggcaaggtgctccatcatgctggaaaaggcattgttcgtcaccaaactgttcctggatggttggga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU390059 True 308 lncRNA 0.44 1 33611516 33611823

Neighbor

gene id symbol gene type direction distance location
LOC110522521 NA coding upstream 25130 33584945 ~ 33586386 (+)
LOC110521085 LOC100380634 coding upstream 135745 33469529 ~ 33489784 (+)
LOC110522514 LOC106571629 coding upstream 200461 33409113 ~ 33411055 (+)
LOC110522513 LOC106568623 coding upstream 205547 33404409 ~ 33405969 (+)
LOC110522512 LOC106568622 coding upstream 209361 33389872 ~ 33402155 (+)
LOC110522523 LOC106608181 coding downstream 21367 33633190 ~ 33636494 (+)
LOC110522524 LOC106608181 coding downstream 33405 33645228 ~ 33647432 (+)
LOC110522526 LOC106608180 coding downstream 42237 33654060 ~ 33656575 (+)
LOC110522527 LOC106608180 coding downstream 57349 33669172 ~ 33673911 (+)
LOC110522531 LOC106608192 coding downstream 518025 34129848 ~ 34133896 (+)
G344673 NA non-coding upstream 10919 33600073 ~ 33600597 (+)
G344670 NA non-coding upstream 15507 33593278 ~ 33596009 (+)
G344647 NA non-coding upstream 57790 33552127 ~ 33554003 (+)
G344659 NA non-coding upstream 68488 33542829 ~ 33543028 (+)
G344650 NA non-coding upstream 75254 33534316 ~ 33536262 (+)
G344685 NA non-coding downstream 6118 33617941 ~ 33618240 (+)
G344692 NA non-coding downstream 17846 33629669 ~ 33630011 (+)
G344740 LOC106608176 non-coding downstream 136317 33748140 ~ 33752828 (+)
G344741 NA non-coding downstream 142071 33753894 ~ 33754145 (+)
G344743 NA non-coding downstream 144114 33755937 ~ 33756163 (+)
G343958 NA other upstream 907145 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1825310 31785865 ~ 31786206 (+)
LOC110522536 LOC105024319 other downstream 779150 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 925178 34536950 ~ 34541410 (+)
LOC110522546 LOC106608201 other downstream 1208619 34807607 ~ 34831281 (+)
G346334 NA other downstream 1462116 35073939 ~ 35074338 (+)
G347151 NA other downstream 2221546 35833369 ~ 35833844 (+)

Expression


Co-expression Network