G344692


Basic Information

Item Value
gene id G344692
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33629669 ~ 33630011 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU390073
accataaacaattcatgaacatgcacctgtggaacagtcgttaagacactaacagcttacagacggtaggcaattaaggtcacagttatgacaacttaggacactagagaggcctttctactgactctggaaaaacaccaaaagaaagatgcccagggtccctgctcatctgcatgaacgtgccttaggcatgctgcaaggaggcatgaggactgcagatgtggccagggcaataaattgcaatgtccgtactgtgagacgcctaagacagcgctacagggagacagaacggacagctgatcatcctcgcagtggccgaccacgtgtaacaacacctgcacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU390073 True 343 lncRNA 0.50 1 33629669 33630011

Neighbor

gene id symbol gene type direction distance location
LOC110522521 NA coding upstream 43283 33584945 ~ 33586386 (+)
LOC110521085 LOC100380634 coding upstream 153898 33469529 ~ 33489784 (+)
LOC110522514 LOC106571629 coding upstream 218614 33409113 ~ 33411055 (+)
LOC110522513 LOC106568623 coding upstream 223700 33404409 ~ 33405969 (+)
LOC110522512 LOC106568622 coding upstream 227514 33389872 ~ 33402155 (+)
LOC110522523 LOC106608181 coding downstream 3179 33633190 ~ 33636494 (+)
LOC110522524 LOC106608181 coding downstream 15217 33645228 ~ 33647432 (+)
LOC110522526 LOC106608180 coding downstream 24049 33654060 ~ 33656575 (+)
LOC110522527 LOC106608180 coding downstream 39161 33669172 ~ 33673911 (+)
LOC110522531 LOC106608192 coding downstream 499837 34129848 ~ 34133896 (+)
G344685 NA non-coding upstream 11429 33617941 ~ 33618240 (+)
G344679 LOC100194703 non-coding upstream 17846 33611516 ~ 33611823 (+)
G344673 NA non-coding upstream 29072 33600073 ~ 33600597 (+)
G344670 NA non-coding upstream 33660 33593278 ~ 33596009 (+)
G344647 NA non-coding upstream 75943 33552127 ~ 33554003 (+)
G344740 LOC106608176 non-coding downstream 118129 33748140 ~ 33752828 (+)
G344741 NA non-coding downstream 123883 33753894 ~ 33754145 (+)
G344743 NA non-coding downstream 125926 33755937 ~ 33756163 (+)
G344750 LOC106608176 non-coding downstream 134022 33764033 ~ 33764286 (+)
G344751 NA non-coding downstream 147535 33777546 ~ 33777773 (+)
G343958 NA other upstream 925298 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 1843463 31785865 ~ 31786206 (+)
LOC110522536 LOC105024319 other downstream 760962 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 906990 34536950 ~ 34541410 (+)
LOC110522546 LOC106608201 other downstream 1190431 34807607 ~ 34831281 (+)
G346334 NA other downstream 1443928 35073939 ~ 35074338 (+)
G347151 NA other downstream 2203358 35833369 ~ 35833844 (+)

Expression


Co-expression Network