Gene
RNA
| Item | Value |
|---|---|
| gene id | G345215 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 33748060 ~ 33748938 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU390639 | False | 700 | lncRNA | 0.36 | 1 | 33748060 | 33748759 |
| TU390638 | False | 826 | lncRNA | 0.35 | 1 | 33748113 | 33748938 |
| TU390640 | True | 647 | lncRNA | 0.36 | 1 | 33748113 | 33748759 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:112001 | LOC106608178 | coding | downstream | 55702 | 33690618 ~ 33692358 (-) |
| LOC110522525 | NA | coding | downstream | 105758 | 33640275 ~ 33643239 (-) |
| LOC110522520 | LOC106608189 | coding | downstream | 157714 | 33577450 ~ 33590346 (-) |
| LOC110522518 | LOC106608186 | coding | downstream | 171789 | 33566563 ~ 33576271 (-) |
| LOC110522517 | LOC106608187 | coding | downstream | 182431 | 33552126 ~ 33565629 (-) |
| LOC110522529 | LOC106608176 | coding | upstream | 1311 | 33749940 ~ 33940233 (-) |
| kcnk10a | LOC106608174 | coding | upstream | 506054 | 34254992 ~ 34280216 (-) |
| LOC110522538 | stxb6 | coding | upstream | 680946 | 34429884 ~ 34436250 (-) |
| LOC110521086 | LOC106608167 | coding | upstream | 691963 | 34440901 ~ 34455193 (-) |
| LOC110522539 | LOC106608168 | coding | upstream | 710375 | 34459313 ~ 34463358 (-) |
| G345216 | NA | non-coding | downstream | 759 | 33746434 ~ 33747301 (-) |
| G345228 | NA | non-coding | downstream | 9939 | 33737792 ~ 33738121 (-) |
| G345204 | NA | non-coding | downstream | 15884 | 33685025 ~ 33732176 (-) |
| G345190 | LOC106608180 | non-coding | downstream | 77085 | 33655097 ~ 33670975 (-) |
| G345182 | NA | non-coding | downstream | 100670 | 33645932 ~ 33647390 (-) |
| G345233 | NA | non-coding | upstream | 4737 | 33753675 ~ 33753957 (-) |
| G345240 | NA | non-coding | upstream | 9227 | 33758165 ~ 33758390 (-) |
| G345245 | NA | non-coding | upstream | 29181 | 33778119 ~ 33778327 (-) |
| G345258 | NA | non-coding | upstream | 42262 | 33791200 ~ 33836504 (-) |
| G344164 | NA | other | downstream | 885956 | 32841256 ~ 32862104 (-) |
| G343300 | antiprot1 | other | downstream | 1624174 | 32107969 ~ 32123886 (-) |
| G342376 | NA | other | downstream | 2516274 | 31189505 ~ 31294180 (-) |
| LOC118964463 | LOC106608127 | other | downstream | 2641930 | 31023759 ~ 31107906 (-) |
| G341017 | NA | other | downstream | 3831870 | 29915662 ~ 29916190 (-) |
| G345248 | NA | other | upstream | 31359 | 33780297 ~ 33780638 (-) |
| G345255 | LOC106585892 | other | upstream | 40556 | 33789494 ~ 33790085 (-) |
| LOC110522548 | 5nt1a | other | upstream | 1053151 | 34799157 ~ 34807617 (-) |
| LOC110522550 | LOC106571659 | other | upstream | 1083501 | 34832436 ~ 34886570 (-) |
