G344770


Basic Information

Item Value
gene id G344770
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 33810157 ~ 33815444 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU390158
cTCTGCCACGAGACCAACATTCTAgctctgccacgcgaccaacattctctctcttacatacgaccaacattctatctcttacatgtgaccatcattatatctctttcatgtgaccaacattctatttttgccacgggaccaacattctatcttttacatgtgaccaacagtctatctcttacatgcaaccaacattctatctcttacatgcaaccaacattctatctcttacacacgaccaacactctatctcttacatgtgaccaacaatctatctctgccacatgaaaaaaattatatctcttacatgcgaccaacattctatttcttacatacgaccaacatgatttatcttctatgcgaccaacattctctcttacatgcgaccaacattctatattttacatgcaaccaacattctatctcttacaggTGACCAaaattctatctcttacatgcgaccaacattctatttcttacatacgaacaacatgatttatcttatatgcgaccaacattctctcttacatgcgaccaacattctatcttttacatgcaaccaacattctatctcttacatgtgaccaacattctatctcttacatgcgaccaacattctatttcttacatacgaccaacattatttctcttatatgcgaccaacatcctctcttacatgcaaccaacatcctctcttacatgcaaccaacattctatctcttacatgcgactaaaattctatctcttacatgtgaccaacagtctatctcttacatgcaaccaacattctatctcttacatgcaaccaacattctatctcttacacacGACCAACACTCTATcgcttacatgtgaccaacaatctatctctgccacatgaaaaaaatgatatctcttacatgcgaccaacattctatctcttacaagCAACCAACATTATTTCTCttatatgcgaccaacattctctcttacatgcaaccaacattctatctcttac

Function

NR:

description
melanoma-associated antigen C1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU390158 True 997 lncRNA 0.37 2 33810157 33815444

Neighbor

gene id symbol gene type direction distance location
LOC110522527 LOC106608180 coding upstream 136246 33669172 ~ 33673911 (+)
LOC110522526 LOC106608180 coding upstream 153582 33654060 ~ 33656575 (+)
LOC110522524 LOC106608181 coding upstream 162725 33645228 ~ 33647432 (+)
LOC110522523 LOC106608181 coding upstream 173663 33633190 ~ 33636494 (+)
LOC110522521 NA coding upstream 223771 33584945 ~ 33586386 (+)
LOC110522531 LOC106608192 coding downstream 314404 34129848 ~ 34133896 (+)
LOC110522532 LOC106608175 coding downstream 352806 34168250 ~ 34200246 (+)
LOC110520988 LOC106571729 coding downstream 411009 34226453 ~ 34229272 (+)
LOC110522534 LOC106608173 coding downstream 503069 34318513 ~ 34338873 (+)
LOC110522535 LOC106608172 coding downstream 541646 34357090 ~ 34364255 (+)
G344753 NA non-coding upstream 30093 33779750 ~ 33780064 (+)
G344751 NA non-coding upstream 32384 33777546 ~ 33777773 (+)
G344750 LOC106608176 non-coding upstream 45871 33764033 ~ 33764286 (+)
G344743 NA non-coding upstream 53994 33755937 ~ 33756163 (+)
G344741 NA non-coding upstream 56012 33753894 ~ 33754145 (+)
G344762 NA non-coding downstream 20524 33835968 ~ 33852266 (+)
G344761 NA non-coding downstream 35247 33850691 ~ 33859872 (+)
G344779 NA non-coding downstream 44959 33860403 ~ 33860627 (+)
G344780 NA non-coding downstream 45852 33861296 ~ 33861722 (+)
G344782 NA non-coding downstream 47714 33863158 ~ 33863379 (+)
G344647 NA other upstream 256154 33552127 ~ 33554003 (+)
LOC110521085 LOC100380634 other upstream 320373 33469529 ~ 33489784 (+)
G343958 NA other upstream 1105786 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 2023951 31785865 ~ 31786206 (+)
LOC110522536 LOC105024319 other downstream 575529 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 721557 34536950 ~ 34541410 (+)
LOC110522546 LOC106608201 other downstream 1004998 34807607 ~ 34831281 (+)
G346334 NA other downstream 1258495 35073939 ~ 35074338 (+)
G347151 NA other downstream 2017925 35833369 ~ 35833844 (+)

Expression


Co-expression Network