Gene
RNA
| Item | Value |
|---|---|
| gene id | G344762 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 33835968 ~ 33852266 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU390149 | False | 357 | lncRNA | 0.36 | 2 | 33835968 | 33849585 |
| TU390150 | True | 338 | lncRNA | 0.35 | 2 | 33835968 | 33852266 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522527 | LOC106608180 | coding | upstream | 162057 | 33669172 ~ 33673911 (+) |
| LOC110522526 | LOC106608180 | coding | upstream | 179393 | 33654060 ~ 33656575 (+) |
| LOC110522524 | LOC106608181 | coding | upstream | 188536 | 33645228 ~ 33647432 (+) |
| LOC110522523 | LOC106608181 | coding | upstream | 199474 | 33633190 ~ 33636494 (+) |
| LOC110522521 | NA | coding | upstream | 249582 | 33584945 ~ 33586386 (+) |
| LOC110522531 | LOC106608192 | coding | downstream | 277582 | 34129848 ~ 34133896 (+) |
| LOC110522532 | LOC106608175 | coding | downstream | 315984 | 34168250 ~ 34200246 (+) |
| LOC110520988 | LOC106571729 | coding | downstream | 374187 | 34226453 ~ 34229272 (+) |
| LOC110522534 | LOC106608173 | coding | downstream | 466247 | 34318513 ~ 34338873 (+) |
| LOC110522535 | LOC106608172 | coding | downstream | 504824 | 34357090 ~ 34364255 (+) |
| G344770 | NA | non-coding | upstream | 20524 | 33810157 ~ 33815444 (+) |
| G344753 | NA | non-coding | upstream | 55904 | 33779750 ~ 33780064 (+) |
| G344751 | NA | non-coding | upstream | 58195 | 33777546 ~ 33777773 (+) |
| G344750 | LOC106608176 | non-coding | upstream | 71682 | 33764033 ~ 33764286 (+) |
| G344743 | NA | non-coding | upstream | 79805 | 33755937 ~ 33756163 (+) |
| G344779 | NA | non-coding | downstream | 8137 | 33860403 ~ 33860627 (+) |
| G344780 | NA | non-coding | downstream | 9030 | 33861296 ~ 33861722 (+) |
| G344782 | NA | non-coding | downstream | 10892 | 33863158 ~ 33863379 (+) |
| G344788 | NA | non-coding | downstream | 16256 | 33868522 ~ 33868732 (+) |
| G344795 | NA | non-coding | downstream | 25772 | 33878038 ~ 33878285 (+) |
| G344647 | NA | other | upstream | 281965 | 33552127 ~ 33554003 (+) |
| LOC110521085 | LOC100380634 | other | upstream | 346184 | 33469529 ~ 33489784 (+) |
| G343958 | NA | other | upstream | 1131597 | 32694986 ~ 32704371 (+) |
| G342707 | LOC106608120 | other | upstream | 2049762 | 31785865 ~ 31786206 (+) |
| LOC110522536 | LOC105024319 | other | downstream | 538707 | 34390869 ~ 34394175 (+) |
| LOC110522530 | LOC106608164 | other | downstream | 684735 | 34536950 ~ 34541410 (+) |
| LOC110522546 | LOC106608201 | other | downstream | 968176 | 34807607 ~ 34831281 (+) |
| G346334 | NA | other | downstream | 1221673 | 35073939 ~ 35074338 (+) |
| G347151 | NA | other | downstream | 1981103 | 35833369 ~ 35833844 (+) |
