G345407


Basic Information

Item Value
gene id G345407
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 34023664 ~ 34023926 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU390840
tttccgtctctcacagacctgttagtttttctttaagaagccctcctgttctccactcattacctgtattaactgcacccgtttgaactcgttacctgtataaaagacacctgtccacacactcaatcaaacagactccaacctctccacaatggccaataccagagagctgtgtaaggacatcagggataaaattgtagacctgcacaaggctgggatgggctacaggacaataggcaagcagcttggtgagaaggcaacaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU390840 True 263 lncRNA 0.46 1 34023664 34023926

Neighbor

gene id symbol gene type direction distance location
LOC110522527 LOC106608180 coding upstream 349753 33669172 ~ 33673911 (+)
LOC110522526 LOC106608180 coding upstream 367089 33654060 ~ 33656575 (+)
LOC110522524 LOC106608181 coding upstream 376232 33645228 ~ 33647432 (+)
LOC110522523 LOC106608181 coding upstream 387170 33633190 ~ 33636494 (+)
LOC110522521 NA coding upstream 437278 33584945 ~ 33586386 (+)
LOC110522531 LOC106608192 coding downstream 105922 34129848 ~ 34133896 (+)
LOC110522532 LOC106608175 coding downstream 144324 34168250 ~ 34200246 (+)
LOC110520988 LOC106571729 coding downstream 202527 34226453 ~ 34229272 (+)
LOC110522534 LOC106608173 coding downstream 294587 34318513 ~ 34338873 (+)
LOC110522535 LOC106608172 coding downstream 333164 34357090 ~ 34364255 (+)
G344795 NA non-coding upstream 145379 33878038 ~ 33878285 (+)
G344788 NA non-coding upstream 154932 33868522 ~ 33868732 (+)
G344782 NA non-coding upstream 160285 33863158 ~ 33863379 (+)
G344780 NA non-coding upstream 161942 33861296 ~ 33861722 (+)
G344779 NA non-coding upstream 163037 33860403 ~ 33860627 (+)
G345433 NA non-coding downstream 32518 34056444 ~ 34058809 (+)
G345450 NA non-coding downstream 43807 34067733 ~ 34068033 (+)
G345507 NA non-coding downstream 88014 34111940 ~ 34112304 (+)
G345513 NA non-coding downstream 93556 34117482 ~ 34117806 (+)
G344647 NA other upstream 469661 33552127 ~ 33554003 (+)
LOC110521085 LOC100380634 other upstream 533880 33469529 ~ 33489784 (+)
G343958 NA other upstream 1319293 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 2237458 31785865 ~ 31786206 (+)
LOC110522536 LOC105024319 other downstream 367047 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 513075 34536950 ~ 34541410 (+)
LOC110522546 LOC106608201 other downstream 796516 34807607 ~ 34831281 (+)
G346334 NA other downstream 1050013 35073939 ~ 35074338 (+)
G347151 NA other downstream 1809443 35833369 ~ 35833844 (+)

Expression


Co-expression Network