G345433


Basic Information

Item Value
gene id G345433
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 34056444 ~ 34058809 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU390869
CTGTAGATGTAAGCTGTAAACTGTAGATGTaaactgtagactgtagatgtaaACTGTAAACTGTAGATgtaagctgtagactgtagatgtaagctgtagactgtagaggTAAGCtgtagactgtagatgtaagCTCTAGATGTAAACTGTAAACTGTAAATgtaagctgtagactgtagatgtaagctgtagactgtagatgtaagCTGTAAACTGTAGAAgtaagctgtagactgtagatgtaagctgtagactgtagatgtgagctgtagactgtagatgtaagctgtagactgtagatgtaagCCGTAGATGTAAACTGTAAGCTGTAAATATAAGCTTCAGACTGTAGATGTAAGCTGTAGACAGTACTCAGTGATTGGGTTTTTACTTGTTGTACTTGGATAACATGTATCACTCACATAAGGACAAAACAGAAAAACTGTCTCATAAAGCTACAGTT
>TU390868
ctgtagatgtaagctgtagactgtagatgtagactgtagatgtaagCTCTAGATGTAAACTGTAAACTGTAAATgtaagctgtagactgtagatgtaagctgtagactgtagatgtaagCTGTAAACTGTAGATGTAAGCTGTAGACTGCAGATGTAAGCTCTAGATGTAAACTGTAGATgtaagctgtagactgtagatgtaagctgtagactgtagatgtaagctgtagactgtagatgtagactgtagatgtaagctgtagactgtagatttAAGCTGTAGACTCTAGATgtaagctgtagactgtagatgtaagctgtagactgtagatgtaaactgtagatgtaagctgtagactgtagatgtagactgtagatgtaagCTCTAGATGTAAACTGTAAACTGTAAATgtaagctgtagactgtagatgtaagctgtagactgtagatgtaagCTGTAAACTGTAGAAgtaagctgtagactgtagatgtaagctgtagactgtagatgtgagctgtagactgtagatgtaagctgtagactgtagatgtaagCCGTAGATGTAAACTGTAAGCTGTAAATATAAGCTTCAGACTGTAGATGTAAGCTGTAGACAGTACTCAGTGATTGGGTTTTTACTTGTTGTACTTGGATAACATGTATCACTCACATAAGGACAAAACAGAAAAACTGTCTCATAAAGCTACAGTT

Function

NR:

description
uncharacterized protein KIAA2026-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU390869 False 463 lncRNA 0.37 2 34056444 34058809
TU390868 True 714 lncRNA 0.38 2 34058069 34058809

Neighbor

gene id symbol gene type direction distance location
LOC110522527 LOC106608180 coding upstream 382533 33669172 ~ 33673911 (+)
LOC110522526 LOC106608180 coding upstream 399869 33654060 ~ 33656575 (+)
LOC110522524 LOC106608181 coding upstream 409012 33645228 ~ 33647432 (+)
LOC110522523 LOC106608181 coding upstream 419950 33633190 ~ 33636494 (+)
LOC110522521 NA coding upstream 470058 33584945 ~ 33586386 (+)
LOC110522531 LOC106608192 coding downstream 71039 34129848 ~ 34133896 (+)
LOC110522532 LOC106608175 coding downstream 109441 34168250 ~ 34200246 (+)
LOC110520988 LOC106571729 coding downstream 167644 34226453 ~ 34229272 (+)
LOC110522534 LOC106608173 coding downstream 259704 34318513 ~ 34338873 (+)
LOC110522535 LOC106608172 coding downstream 298281 34357090 ~ 34364255 (+)
G345407 NA non-coding upstream 32518 34023664 ~ 34023926 (+)
G344795 NA non-coding upstream 178159 33878038 ~ 33878285 (+)
G344788 NA non-coding upstream 187712 33868522 ~ 33868732 (+)
G344782 NA non-coding upstream 193065 33863158 ~ 33863379 (+)
G344780 NA non-coding upstream 194722 33861296 ~ 33861722 (+)
G345450 NA non-coding downstream 8924 34067733 ~ 34068033 (+)
G345507 NA non-coding downstream 53131 34111940 ~ 34112304 (+)
G345513 NA non-coding downstream 58673 34117482 ~ 34117806 (+)
G345584 NA non-coding downstream 154872 34213681 ~ 34213880 (+)
G344647 NA other upstream 502441 33552127 ~ 33554003 (+)
LOC110521085 LOC100380634 other upstream 566660 33469529 ~ 33489784 (+)
G343958 NA other upstream 1352073 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 2270238 31785865 ~ 31786206 (+)
LOC110522536 LOC105024319 other downstream 332164 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 478192 34536950 ~ 34541410 (+)
LOC110522546 LOC106608201 other downstream 761633 34807607 ~ 34831281 (+)
G346334 NA other downstream 1015130 35073939 ~ 35074338 (+)
G347151 NA other downstream 1774560 35833369 ~ 35833844 (+)

Expression


Co-expression Network