G345513


Basic Information

Item Value
gene id G345513
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 34117482 ~ 34117806 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU390958
atttgttttattattatagAGACTCAACTCACATAATAAATTCAAGTAAGGGCTTAGAACTCAGAAATTGCCTTCCAAACGTTGTTCGTTAGATGCAACACCCTACAGAGGAAGCTTCACTTGAAAATCAATTCAACATCCCTTAAACAATTATTGGAGAACGATAGATGAGCTCACTTGTACAGTACATAGTGAGAAAATGACTTTTAAGCTATAAACAGTTTAGTATTCAAGCGTTTTGTGTCCGCTCGGTTCTTAAATGGTAAACGGTTTCCGTTTCAAGACATAATAAATACACCCCTGGCCTACACAACATGGATTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU390958 True 325 lncRNA 0.37 1 34117482 34117806

Neighbor

gene id symbol gene type direction distance location
LOC110522527 LOC106608180 coding upstream 443571 33669172 ~ 33673911 (+)
LOC110522526 LOC106608180 coding upstream 460907 33654060 ~ 33656575 (+)
LOC110522524 LOC106608181 coding upstream 470050 33645228 ~ 33647432 (+)
LOC110522523 LOC106608181 coding upstream 480988 33633190 ~ 33636494 (+)
LOC110522521 NA coding upstream 531096 33584945 ~ 33586386 (+)
LOC110522531 LOC106608192 coding downstream 12042 34129848 ~ 34133896 (+)
LOC110522532 LOC106608175 coding downstream 50444 34168250 ~ 34200246 (+)
LOC110520988 LOC106571729 coding downstream 108647 34226453 ~ 34229272 (+)
LOC110522534 LOC106608173 coding downstream 200707 34318513 ~ 34338873 (+)
LOC110522535 LOC106608172 coding downstream 239284 34357090 ~ 34364255 (+)
G345507 NA non-coding upstream 5178 34111940 ~ 34112304 (+)
G345450 NA non-coding upstream 49449 34067733 ~ 34068033 (+)
G345433 NA non-coding upstream 58673 34056444 ~ 34058809 (+)
G345407 NA non-coding upstream 93556 34023664 ~ 34023926 (+)
G344795 NA non-coding upstream 239197 33878038 ~ 33878285 (+)
G345584 NA non-coding downstream 95875 34213681 ~ 34213880 (+)
G345593 NA non-coding downstream 105410 34223216 ~ 34223535 (+)
G345598 NA non-coding downstream 112956 34230762 ~ 34231004 (+)
G345610 LOC106608174 non-coding downstream 137207 34255013 ~ 34257193 (+)
G344647 NA other upstream 563479 33552127 ~ 33554003 (+)
LOC110521085 LOC100380634 other upstream 627698 33469529 ~ 33489784 (+)
G343958 NA other upstream 1413111 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 2331276 31785865 ~ 31786206 (+)
LOC110522536 LOC105024319 other downstream 273167 34390869 ~ 34394175 (+)
LOC110522530 LOC106608164 other downstream 419195 34536950 ~ 34541410 (+)
LOC110522546 LOC106608201 other downstream 702636 34807607 ~ 34831281 (+)
G346334 NA other downstream 956133 35073939 ~ 35074338 (+)
G347151 NA other downstream 1715563 35833369 ~ 35833844 (+)

Expression


Co-expression Network