G345593


Basic Information

Item Value
gene id G345593
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 34223216 ~ 34223535 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU391055
ccattcttttttagtgttttacgtatggTAGACTCATcattttattttgctcctttgcaccccagtatttctacctgcacattcatcttctgccgatctaccattccagtgtttaattgctatatggcctatttatttccttaacttacctcatttgcactcactgtatatagactttttgttttattttgttctactgtattattgactgtatgttttgtttattccatgtgtaactctgggttgttgtatgtgtcgaattgctacgctttatcttggccaggtcgcagttgcaaatgagaacttgttctcaactagcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU391055 True 320 lncRNA 0.37 1 34223216 34223535

Neighbor

gene id symbol gene type direction distance location
LOC110522532 LOC106608175 coding upstream 24164 34168250 ~ 34200246 (+)
LOC110522531 LOC106608192 coding upstream 89320 34129848 ~ 34133896 (+)
LOC110522527 LOC106608180 coding upstream 549305 33669172 ~ 33673911 (+)
LOC110522526 LOC106608180 coding upstream 566641 33654060 ~ 33656575 (+)
LOC110522524 LOC106608181 coding upstream 575784 33645228 ~ 33647432 (+)
LOC110520988 LOC106571729 coding downstream 2918 34226453 ~ 34229272 (+)
LOC110522534 LOC106608173 coding downstream 94978 34318513 ~ 34338873 (+)
LOC110522535 LOC106608172 coding downstream 133555 34357090 ~ 34364255 (+)
LOC110522536 LOC105024319 coding downstream 167334 34390869 ~ 34394175 (+)
LOC110522537 LOC106608171 coding downstream 170785 34394320 ~ 34397704 (+)
G345584 NA non-coding upstream 9336 34213681 ~ 34213880 (+)
G345513 NA non-coding upstream 105410 34117482 ~ 34117806 (+)
G345507 NA non-coding upstream 110912 34111940 ~ 34112304 (+)
G345450 NA non-coding upstream 155183 34067733 ~ 34068033 (+)
G345598 NA non-coding downstream 7227 34230762 ~ 34231004 (+)
G345610 LOC106608174 non-coding downstream 31478 34255013 ~ 34257193 (+)
G345626 NA non-coding downstream 59181 34282716 ~ 34287546 (+)
G345627 NA non-coding downstream 61741 34285276 ~ 34289788 (+)
G345634 NA non-coding downstream 77025 34300560 ~ 34306526 (+)
LOC110522521 NA other upstream 636905 33584945 ~ 33586386 (+)
G344647 NA other upstream 669213 33552127 ~ 33554003 (+)
LOC110521085 LOC100380634 other upstream 733432 33469529 ~ 33489784 (+)
G343958 NA other upstream 1518845 32694986 ~ 32704371 (+)
G342707 LOC106608120 other upstream 2437010 31785865 ~ 31786206 (+)
LOC110522530 LOC106608164 other downstream 313466 34536950 ~ 34541410 (+)
LOC110522546 LOC106608201 other downstream 596907 34807607 ~ 34831281 (+)
G346334 NA other downstream 850404 35073939 ~ 35074338 (+)
G347151 NA other downstream 1609834 35833369 ~ 35833844 (+)

Expression


Co-expression Network