G345837


Basic Information

Item Value
gene id G345837
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 34311929 ~ 34338842 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU391343
TTTAGTGCAGAAACCCTTTCCTTCTTCCTGTGTGCTATAAAACTATTGTGACATGATCTAAATGGAAGTCGGTCCAAGATCCACCTTACCAGTGTGACGTCAATCCATCAGCTCTTTAGTCTGAATTCAGGACAACACAGAACAATCCAAATCAAAACAGAATAATAACAAATATATGAAATGCATTCAGTGCATGGGTAATAAAAGCAACTGGGCCACATTCAGAATACAAATAAAAAGAGGGCTTGTTTTTTTGTTGGGAGCTGGATGGGGCTGCCGTCTGCAGTATCTGAGACAAGCTCCAGGCTGCAGACTCCGAggcaatctctctctttctctctttctctctgttccacAGCACACAGGATTAGTGATAAACTCTCACTCCATAAACTAATGATCACAAAGCGCAAACATGGAGAAAACAGTCAAATGTAAAAGCACAAGTCTATACACCACAACAGTTAGTAAAACTCTTCATACTCCTTTTAGATATTCCACAGTGGTTGTTTTCAAATGGTGTGTTCATAAGATgaagtgtgtgtatttgtttgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU391343 True 598 lncRNA 0.40 2 34311929 34338842

Neighbor

gene id symbol gene type direction distance location
kcnk10a LOC106608174 coding downstream 31713 34254992 ~ 34280216 (-)
LOC110522529 LOC106608176 coding downstream 371696 33749940 ~ 33940233 (-)
zgc:112001 LOC106608178 coding downstream 619571 33690618 ~ 33692358 (-)
LOC110522525 NA coding downstream 669627 33640275 ~ 33643239 (-)
LOC110522520 LOC106608189 coding downstream 721583 33577450 ~ 33590346 (-)
LOC110522538 stxb6 coding upstream 91042 34429884 ~ 34436250 (-)
LOC110521086 LOC106608167 coding upstream 102059 34440901 ~ 34455193 (-)
LOC110522539 LOC106608168 coding upstream 120471 34459313 ~ 34463358 (-)
LOC110522542 LOC106608165 coding upstream 135872 34474714 ~ 34478446 (-)
LOC110522545 LOC106608202 coding upstream 291467 34630309 ~ 34682247 (-)
G345823 NA non-coding downstream 15310 34291073 ~ 34296619 (-)
G345818 NA non-coding downstream 26076 34280522 ~ 34285853 (-)
G345799 NA non-coding downstream 72595 34239111 ~ 34239334 (-)
G345785 NA non-coding downstream 88962 34222644 ~ 34222967 (-)
G345744 LOC107549545 non-coding downstream 111679 34148504 ~ 34200250 (-)
G345862 NA non-coding upstream 6789 34345631 ~ 34346053 (-)
G345869 NA non-coding upstream 19361 34358203 ~ 34358440 (-)
G345871 LOC106608172 non-coding upstream 22146 34360988 ~ 34364997 (-)
G345872 NA non-coding upstream 26282 34365124 ~ 34365675 (-)
G345873 NA non-coding upstream 27133 34365975 ~ 34366304 (-)
G345255 LOC106585892 other downstream 521844 33789494 ~ 33790085 (-)
G345248 NA other downstream 531291 33780297 ~ 33780638 (-)
G344164 NA other downstream 1449825 32841256 ~ 32862104 (-)
G343300 antiprot1 other downstream 2188043 32107969 ~ 32123886 (-)
LOC110522548 5nt1a other upstream 463247 34799157 ~ 34807617 (-)
LOC110522550 LOC106571659 other upstream 493597 34832436 ~ 34886570 (-)
LOC110522554 LOC106608208 other upstream 652102 34989546 ~ 35064960 (-)
G346754 NA other upstream 878482 35217324 ~ 35217782 (-)
G347016 NA other upstream 1213231 35552073 ~ 35552585 (-)

Expression

G345837 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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G345837 Expression in each Bioproject

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G345837 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network