G345682


Basic Information

Item Value
gene id G345682
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 34436713 ~ 34438451 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU391164
TTGAATTTGCCACGACACTATTTCCAAAGCTCACTGATATGGCTCGTCTTTATTTACTCAAAAGTAGGCCTAATGTTGAATGCACGgagaccacagacagacagctgtagaGATATAGTTTAATGTAAAACAAATGGTTTACCAAGGTTAAGCACCACGTCATTCATTTGAAGAGGGAACGAAAAAAaatggtttccactagttaccacagccccAAAGTCGAAATTGGCTatcgtaaaaatgtatgaaaacaaaaatgtgcttaatttaaggttaggtttgggCATAAGTTTAGCAGGGTGGTTCGGGTTAGGTTTtgaatcacattttaagaagatacatttttAGAAAAATTCGTTtttttactttgtggctgtggtaacaaGTGGCGACCGTTAAAAAAGAGTGAGCATGAGTGGATCAGACAGTGAGTGGAGAGGAGACATGACAGAAAAATAGTGTCCTCTGGTGGAAGGCAAAAGGGAATATGGCTGAAGGGTGGACGACCCACAACACAATCACAATTACATTTCCTcctgcacaggaggttggtggcaccttaattggggaggacgggctcgtggtaatgggtgaaggaggacgggctcgtggtagtGGGTGAAGggggacgggctcgtggtaatgggtGAAGGGGGACGGGCCCGTGGTAATGGGTGAAGGGGGACGGGCCCGTGGTAATGGGTGAAGggggacgggctcgtggtaatggatgAAGagggacgggctcgtggtaatggatgAAGagggacgggctcgtggtaatggatgAAGGGGGACGGGCCCGTGGTAATGGATGAAGGGGGACGGGCCCGTGGTAATGGATGAAGggggacgggctcgtggtaatggatgAAGggggacgggctcgtggtaatggatgAAGgcggacaggctcgtggtaatggatgAAGGGGGACAGGCCCGTGGTAATGGGTGAAGGGGgactggctcgtggtaatggGTGAAGggggacgggcttgtggtaatggatGAAGgcggacaggctcgtggtaatggatgAAGgcggacaggctcgtggtaatggatgAAGGGGGACAGGCCCGTGGTAATGGGTGAAGGGGgactggctcgtggtaatggGTGAAGggggacgggcttgtggtaatggatGAAGgcggacaggctcgtggtaatggatgAAGgcggacaggctcgtggtaatggatgAAGGGGGACGGGCCCGTGGTAATGGGTGAAGggggacgggctcgtggtaatgggtGAAGggggacgggctcgtggtaatggatgAAGggggacgggctcgtggtaatggatgAAGggggacgggctcgtggtaatgggtGAAGggggacgggctcgtggtaatgggtGAAGggggacgggctcgtggtaatggatgAAGggggacgggctcgtggtaatggattctccttctctctctctttctctctctcggaggacctgagccctaggaccatgccccaggactacctgacatgatgactccttgctgtccccagtccacctggctgtgctgctgctccagtttcaactgttctgccttattattattcgaccatgctgatcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU391164 True 1655 lncRNA 0.53 2 34436713 34438451

Neighbor

gene id symbol gene type direction distance location
LOC110522537 LOC106608171 coding upstream 39009 34394320 ~ 34397704 (+)
LOC110522536 LOC105024319 coding upstream 42538 34390869 ~ 34394175 (+)
LOC110522535 LOC106608172 coding upstream 72458 34357090 ~ 34364255 (+)
LOC110522534 LOC106608173 coding upstream 97840 34318513 ~ 34338873 (+)
LOC110520988 LOC106571729 coding upstream 207441 34226453 ~ 34229272 (+)
LOC110522540 LOC106608169 coding downstream 16741 34455192 ~ 34459207 (+)
LOC110522530 LOC106608164 coding downstream 98499 34536950 ~ 34541410 (+)
LOC110522544 LOC106571654 coding downstream 181449 34619900 ~ 34627191 (+)
rdh14b rdh14 coding downstream 188914 34627365 ~ 34630001 (+)
LOC110522546 LOC106608201 coding downstream 369156 34807607 ~ 34831281 (+)
G345658 NA non-coding upstream 71041 34365162 ~ 34365672 (+)
G345648 NA non-coding upstream 93063 34343435 ~ 34343650 (+)
G345647 NA non-coding upstream 93330 34343174 ~ 34343383 (+)
G345634 NA non-coding upstream 130187 34300560 ~ 34306526 (+)
G345627 NA non-coding upstream 146925 34285276 ~ 34289788 (+)
G345688 NA non-coding downstream 632 34439083 ~ 34441745 (+)
G345967 NA non-coding downstream 125332 34563783 ~ 34564321 (+)
G345968 NA non-coding downstream 127617 34566068 ~ 34566283 (+)
G346002 NA non-coding downstream 178347 34616798 ~ 34617208 (+)
G346003 NA non-coding downstream 178887 34617338 ~ 34617753 (+)
LOC110522521 NA other upstream 850402 33584945 ~ 33586386 (+)
G344647 NA other upstream 882710 33552127 ~ 33554003 (+)
LOC110521085 LOC100380634 other upstream 946929 33469529 ~ 33489784 (+)
G343958 NA other upstream 1732342 32694986 ~ 32704371 (+)
G346334 NA other downstream 635488 35073939 ~ 35074338 (+)
G347151 NA other downstream 1394918 35833369 ~ 35833844 (+)
G347178 NA other downstream 1469795 35908246 ~ 35908451 (+)

Expression


Co-expression Network