G346003


Basic Information

Item Value
gene id G346003
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 34617338 ~ 34617753 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU391530
cacctataatttagcccaaacaattacctctttccctactgtatttattttatttatttatttattttgctccttttgcaccccattatttttatttctactttgcacattcttccactgcaaatctaccattccagtgttttacttgctatattgtatttactttgccaccatggccttttttttgccttgacctcccttatctcacctcatttgctcacattgtatatagacttgattatactgtattatttactgtatgtttgttttactccatgtgtaactctgtgttgtctgttcacactgctatgctttatcttggccaggtcgcaattgtaaatgagaacttgttctcaacttgcctacctggttaaataaaggtgaaataaataaaataaataaaaattgccCAGCGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU391530 True 416 lncRNA 0.34 1 34617338 34617753

Neighbor

gene id symbol gene type direction distance location
LOC110522530 LOC106608164 coding upstream 75928 34536950 ~ 34541410 (+)
LOC110522540 LOC106608169 coding upstream 158131 34455192 ~ 34459207 (+)
LOC110522537 LOC106608171 coding upstream 219634 34394320 ~ 34397704 (+)
LOC110522536 LOC105024319 coding upstream 223163 34390869 ~ 34394175 (+)
LOC110522535 LOC106608172 coding upstream 253083 34357090 ~ 34364255 (+)
LOC110522544 LOC106571654 coding downstream 2147 34619900 ~ 34627191 (+)
rdh14b rdh14 coding downstream 9612 34627365 ~ 34630001 (+)
LOC110522546 LOC106608201 coding downstream 189854 34807607 ~ 34831281 (+)
LOC110522552 LOC106608197 coding downstream 275376 34893129 ~ 34900917 (+)
LOC110521087 LOC106608196 coding downstream 285097 34902850 ~ 34916426 (+)
G346002 NA non-coding upstream 130 34616798 ~ 34617208 (+)
G345968 NA non-coding upstream 51055 34566068 ~ 34566283 (+)
G345967 NA non-coding upstream 53017 34563783 ~ 34564321 (+)
G345681 stxb6 non-coding upstream 92499 34429810 ~ 34524839 (+)
G346040 NA non-coding downstream 65112 34682865 ~ 34683139 (+)
G346054 NA non-coding downstream 94865 34712618 ~ 34713059 (+)
G346175 NA non-coding downstream 109940 34727693 ~ 34727932 (+)
G346186 5nt1a non-coding downstream 144120 34761873 ~ 34800749 (+)
G346192 NA non-coding downstream 148639 34766392 ~ 34767694 (+)
LOC110522521 NA other upstream 1031027 33584945 ~ 33586386 (+)
G344647 NA other upstream 1063335 33552127 ~ 33554003 (+)
LOC110521085 LOC100380634 other upstream 1127554 33469529 ~ 33489784 (+)
G346334 NA other downstream 456186 35073939 ~ 35074338 (+)
G347151 NA other downstream 1215616 35833369 ~ 35833844 (+)
G347178 NA other downstream 1290493 35908246 ~ 35908451 (+)
LOC110522562 LOC105017690 other downstream 1421413 36039096 ~ 36123362 (+)

Expression


Co-expression Network