G346192


Basic Information

Item Value
gene id G346192
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 34766392 ~ 34767694 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU391734
TAAATtgttggggctgcctctcgtcccagccccgctgccgtgctgcctcctcatatcacCACCGCtcagctttagctgcctccagctctgccttggggcggcgatattccccagcctgtgcccagggtcctttgccatccaaaatctcctcccatgccCAGGAGTCTTGCGTTTTCGGCCGCTGCCCgttaacacgctgcttggtccttggttggtgggtgattctgtcacgctcgtcgttggaatgaggtgaggaccaaagcgcagcgtggtaagtgttcatcaaaTATTTATTAAAccgagaacactaaacaaaataacaaaggagaaacgcaacgaaacagttctgaaaggtgacaaacacataacagaaaataatcacccaccaaacacaagtgggaaatggctacctaagtatgattctcaatcagagacaactaacgacacctgcctctgagtgagcaccataccaggccaaacgcaaaacacaacatagaaaaaggaacatagacaacccacccaacttacgccctgaccaaactaaaacaaagacataacaaaataactaaggtcagaatgtgacagttgtatctttgctataaaagatctcagtAGCCATTGTGTTGACACTTTCAATGGTTCAATAGAAATGGTGAATCGTTGAAAGTCATAgctattgcaaagctcttattattaaagatttagtttaagtataactctgacttgtgtgttaAGTTTGTCTCTCTATTTGATATtaaagaaattaaccaccacagCCTTCCGATTGCCAATGGGGCTTTGCCCTCCCGTCATACAGATTCTctctgtcacgaatcccgtttcctgagtctgttttttgcctatgttctgtcctggagtgttttttccggcgtcctggaacgcaccctgtctggttgccgggcaatgtagccagttggggtttctgattacccgcacctgtatcccatcagctatctgcacacctggtcctgatcataatctctcctcttcataagcccggacctgacatccattccctgccggatcgttagccatgaacattactcacccggatcatttaccccattcccgcctggtcgtcgtcggattccgcttccccattggatccacctatttactcccatcaactcaccaccgctgcccgctacgccacctggatatatctaaccattcactttca

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU391734 True 1201 lncRNA 0.47 2 34766392 34767694

Neighbor

gene id symbol gene type direction distance location
rdh14b rdh14 coding upstream 136391 34627365 ~ 34630001 (+)
LOC110522544 LOC106571654 coding upstream 139201 34619900 ~ 34627191 (+)
LOC110522530 LOC106608164 coding upstream 224982 34536950 ~ 34541410 (+)
LOC110522540 LOC106608169 coding upstream 307185 34455192 ~ 34459207 (+)
LOC110522537 LOC106608171 coding upstream 368688 34394320 ~ 34397704 (+)
LOC110522546 LOC106608201 coding downstream 39913 34807607 ~ 34831281 (+)
LOC110522552 LOC106608197 coding downstream 125435 34893129 ~ 34900917 (+)
LOC110521087 LOC106608196 coding downstream 135156 34902850 ~ 34916426 (+)
LOC110522553 LOC106608207 coding downstream 162556 34930250 ~ 34970463 (+)
LOC110521089 LOC106608211 coding downstream 481923 35249617 ~ 35418424 (+)
G346175 NA non-coding upstream 38460 34727693 ~ 34727932 (+)
G346054 NA non-coding upstream 53333 34712618 ~ 34713059 (+)
G346040 NA non-coding upstream 83253 34682865 ~ 34683139 (+)
G346003 NA non-coding upstream 148639 34617338 ~ 34617753 (+)
G346002 NA non-coding upstream 149184 34616798 ~ 34617208 (+)
G346222 NA non-coding downstream 45722 34813416 ~ 34813658 (+)
G346227 NA non-coding downstream 64757 34832451 ~ 34837010 (+)
G346229 NA non-coding downstream 71172 34838866 ~ 34840441 (+)
G346264 NA non-coding downstream 158029 34925723 ~ 34926041 (+)
G346294 NA non-coding downstream 219701 34987395 ~ 34988003 (+)
LOC110522536 LOC105024319 other upstream 374129 34390869 ~ 34394175 (+)
LOC110522521 NA other upstream 1180081 33584945 ~ 33586386 (+)
G344647 NA other upstream 1212389 33552127 ~ 33554003 (+)
LOC110521085 LOC100380634 other upstream 1276608 33469529 ~ 33489784 (+)
G346334 NA other downstream 306245 35073939 ~ 35074338 (+)
G347151 NA other downstream 1065675 35833369 ~ 35833844 (+)
G347178 NA other downstream 1140552 35908246 ~ 35908451 (+)
LOC110522562 LOC105017690 other downstream 1271472 36039096 ~ 36123362 (+)

Expression


Co-expression Network