G346222


Basic Information

Item Value
gene id G346222
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 34813416 ~ 34813658 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU391764
CTTGAATTAGAATAGTGTGGACAAACCTGGTACATATTTGTCAGAGTAACTCGGCTGTCAACATATATACTTCGTTAGTTGGATGTCAAATGTTCTTTCACTTTTAATGACTGATTTTGTGAACtgctttttaaaatatattgtgGCTGTTACCTGGATACCAGATGCAGCCCTGAGGCTCTGGACTTCagttgacatactgtacatagattGGCCCAAGCAACCCTACACACTTACCTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU391764 True 243 lncRNA 0.40 1 34813416 34813658

Neighbor

gene id symbol gene type direction distance location
rdh14b rdh14 coding upstream 183415 34627365 ~ 34630001 (+)
LOC110522544 LOC106571654 coding upstream 186225 34619900 ~ 34627191 (+)
LOC110522530 LOC106608164 coding upstream 272006 34536950 ~ 34541410 (+)
LOC110522540 LOC106608169 coding upstream 354209 34455192 ~ 34459207 (+)
LOC110522537 LOC106608171 coding upstream 415712 34394320 ~ 34397704 (+)
LOC110522552 LOC106608197 coding downstream 79471 34893129 ~ 34900917 (+)
LOC110521087 LOC106608196 coding downstream 89192 34902850 ~ 34916426 (+)
LOC110522553 LOC106608207 coding downstream 116592 34930250 ~ 34970463 (+)
LOC110521089 LOC106608211 coding downstream 435959 35249617 ~ 35418424 (+)
LOC110521090 LOC106608213 coding downstream 748330 35561988 ~ 35723593 (+)
G346186 5nt1a non-coding upstream 12667 34761873 ~ 34800749 (+)
G346192 NA non-coding upstream 45722 34766392 ~ 34767694 (+)
G346175 NA non-coding upstream 85484 34727693 ~ 34727932 (+)
G346054 NA non-coding upstream 100357 34712618 ~ 34713059 (+)
G346040 NA non-coding upstream 130277 34682865 ~ 34683139 (+)
G346227 NA non-coding downstream 18793 34832451 ~ 34837010 (+)
G346229 NA non-coding downstream 25208 34838866 ~ 34840441 (+)
G346264 NA non-coding downstream 112065 34925723 ~ 34926041 (+)
G346294 NA non-coding downstream 173737 34987395 ~ 34988003 (+)
G346295 NA non-coding downstream 174484 34988142 ~ 34988828 (+)
LOC110522536 LOC105024319 other upstream 421153 34390869 ~ 34394175 (+)
LOC110522521 NA other upstream 1227105 33584945 ~ 33586386 (+)
G344647 NA other upstream 1259413 33552127 ~ 33554003 (+)
LOC110521085 LOC100380634 other upstream 1323632 33469529 ~ 33489784 (+)
LOC110522546 LOC106608201 other downstream 6784 34807607 ~ 34831281 (+)
G346334 NA other downstream 260281 35073939 ~ 35074338 (+)
G347151 NA other downstream 1019711 35833369 ~ 35833844 (+)
G347178 NA other downstream 1094588 35908246 ~ 35908451 (+)
LOC110522562 LOC105017690 other downstream 1225508 36039096 ~ 36123362 (+)

Expression


Co-expression Network