G346294


Basic Information

Item Value
gene id G346294
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 34987395 ~ 34988003 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU391839
taataatactttaatACTCACTTCATCAATTAAGTAGAAATAGTTTTCAGTTTTCAGGTTGGATTGTACATTTCTATTTGAACGTTTGTCAATGAGGCTGTCTGCACTCTGCATTCTTTGACTTCAAGGCTTTACTTGTGGAGGAAAGTACAGGAAGGTTTCTTTCACACCCACtgattactattattattattacgaatcctgctaccagtcaccttttTCCTaaaccccacctacatgtacaaatctACCTCAAATACTTCAGTATCCTGCACATTGTACATTtggtattggcactgaccctgtatagagCTTCCTTTCTTATTTCCCATGTTTTAtttatataataattattattattatcatttgttaaaaaaaaaatgtttttagttaTAATATTTTGATATTGATTACAGCGCTGCTGGGTACATTTGGAagtgaagcatttcactgtgcatGTGACAAGACTTGAACTTGAAATACAGTTTCACACGAGCACCCCTCTGCCCcctcacacgtgcacacacacacacacacacacacagtgccttgcaaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU391839 True 609 lncRNA 0.37 1 34987395 34988003

Neighbor

gene id symbol gene type direction distance location
LOC110522553 LOC106608207 coding upstream 16932 34930250 ~ 34970463 (+)
LOC110521087 LOC106608196 coding upstream 70969 34902850 ~ 34916426 (+)
LOC110522552 LOC106608197 coding upstream 86478 34893129 ~ 34900917 (+)
LOC110522546 LOC106608201 coding upstream 156114 34807607 ~ 34831281 (+)
rdh14b rdh14 coding upstream 357394 34627365 ~ 34630001 (+)
LOC110521089 LOC106608211 coding downstream 261614 35249617 ~ 35418424 (+)
LOC110521090 LOC106608213 coding downstream 573985 35561988 ~ 35723593 (+)
LOC110522555 LOC106608214 coding downstream 744089 35732092 ~ 35761259 (+)
LOC110522558 LOC106571671 coding downstream 815945 35803948 ~ 35819308 (+)
LOC118964470 NA coding downstream 895165 35883168 ~ 35884241 (+)
G346264 NA non-coding upstream 61354 34925723 ~ 34926041 (+)
G346229 NA non-coding upstream 146954 34838866 ~ 34840441 (+)
G346227 NA non-coding upstream 150385 34832451 ~ 34837010 (+)
G346222 NA non-coding upstream 173737 34813416 ~ 34813658 (+)
G346186 5nt1a non-coding upstream 186646 34761873 ~ 34800749 (+)
G346295 NA non-coding downstream 139 34988142 ~ 34988828 (+)
G346342 NA non-coding downstream 121951 35109954 ~ 35115330 (+)
G346346 NA non-coding downstream 152984 35140987 ~ 35141198 (+)
G346350 NA non-coding downstream 174531 35162534 ~ 35163109 (+)
G346351 NA non-coding downstream 185777 35173780 ~ 35174189 (+)
LOC110522530 LOC106608164 other upstream 447935 34536950 ~ 34541410 (+)
LOC110522536 LOC105024319 other upstream 595132 34390869 ~ 34394175 (+)
LOC110522521 NA other upstream 1401084 33584945 ~ 33586386 (+)
G344647 NA other upstream 1433392 33552127 ~ 33554003 (+)
G346334 NA other downstream 85936 35073939 ~ 35074338 (+)
G347151 NA other downstream 845366 35833369 ~ 35833844 (+)
G347178 NA other downstream 920243 35908246 ~ 35908451 (+)
LOC110522562 LOC105017690 other downstream 1051163 36039096 ~ 36123362 (+)
G348133 NA other downstream 2172091 37160094 ~ 37161123 (+)

Expression

G346294 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.5.
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G346294 Expression in each Bioproject

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G346294 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 50.
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Co-expression Network