G346342


Basic Information

Item Value
gene id G346342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 35109954 ~ 35115330 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU391894
gaagaggaccaaggtgcagcgtggtacatgtccATGATAATTTATTCAACCTGACCACTgacacaaaaaaacaactacccacaaaacagttctgtctggtgcaaacacaaaacaactacccacaaaacagttctgtctggtgcaaacacaaaacaactacccacaaaacagttctgtctggtgcaaacacaaaacaactacccacaaaacagttctgtctggtgcacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacacaacccagtTATGTCTGGTGcgaacacaaaacagaaaacaacaacccacaaaacacaggtgggaaaaagctgcctaagtatgattctcaatcagagacaacgatagacagctgcctctgattgagaaccacacccggccaaacacaaagaaatagaaaacatagaaataaagaaactagactgcccaccctagtcacacacatctatggtcagggcgtgacactggcaAACTCActtaacacaaatgctttgtttgtcatTTAtgactgagtgttggagtgtgcccgtggctttccgtaaataaataaaaaacaagaaattGGTGCttagtctggtttgcttaatataaggaatttgaaatgatttatacttttacttttgatacttaagtatgttttaaaccaaatacttaaAGACtattactcaagtagtattttactgggtgacttctaCTCTTTCTTGAGTCattttttattaaggtatcttttcCTTTCACTCCAGTATGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU391894 True 879 lncRNA 0.39 2 35109954 35115330
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110522553 LOC106608207 coding upstream 139491 34930250 ~ 34970463 (+)
LOC110521087 LOC106608196 coding upstream 193528 34902850 ~ 34916426 (+)
LOC110522552 LOC106608197 coding upstream 209037 34893129 ~ 34900917 (+)
LOC110522546 LOC106608201 coding upstream 278673 34807607 ~ 34831281 (+)
rdh14b rdh14 coding upstream 479953 34627365 ~ 34630001 (+)
LOC110521089 LOC106608211 coding downstream 134287 35249617 ~ 35418424 (+)
LOC110521090 LOC106608213 coding downstream 446658 35561988 ~ 35723593 (+)
LOC110522555 LOC106608214 coding downstream 616762 35732092 ~ 35761259 (+)
LOC110522558 LOC106571671 coding downstream 688618 35803948 ~ 35819308 (+)
LOC118964470 NA coding downstream 767838 35883168 ~ 35884241 (+)
G346295 NA non-coding upstream 121126 34988142 ~ 34988828 (+)
G346294 NA non-coding upstream 121951 34987395 ~ 34988003 (+)
G346264 NA non-coding upstream 183913 34925723 ~ 34926041 (+)
G346229 NA non-coding upstream 269513 34838866 ~ 34840441 (+)
G346227 NA non-coding upstream 272944 34832451 ~ 34837010 (+)
G346346 NA non-coding downstream 25657 35140987 ~ 35141198 (+)
G346350 NA non-coding downstream 47204 35162534 ~ 35163109 (+)
G346351 NA non-coding downstream 58450 35173780 ~ 35174189 (+)
G346352 NA non-coding downstream 63634 35178964 ~ 35179870 (+)
G346353 NA non-coding downstream 64607 35179937 ~ 35180250 (+)
G346334 NA other upstream 35616 35073939 ~ 35074338 (+)
LOC110522530 LOC106608164 other upstream 570494 34536950 ~ 34541410 (+)
LOC110522536 LOC105024319 other upstream 717691 34390869 ~ 34394175 (+)
LOC110522521 NA other upstream 1523643 33584945 ~ 33586386 (+)
G347151 NA other downstream 718039 35833369 ~ 35833844 (+)
G347178 NA other downstream 792916 35908246 ~ 35908451 (+)
LOC110522562 LOC105017690 other downstream 923836 36039096 ~ 36123362 (+)
G348133 NA other downstream 2044764 37160094 ~ 37161123 (+)
LOC110522576 LOC106608246 other downstream 2330137 37445368 ~ 37501952 (+)

Expression

G346342 Expression in all Baseline Samples

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G346342 Expression in each Bioproject

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G346342 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network