G346352


Basic Information

Item Value
gene id G346352
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 35178964 ~ 35179870 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU391911
actaatggggacccataataaaccccaggaagagtagattctgccttggcaggaactaatggggatccataataaaccccaggaagagtagattctgccttggtaggaactaatggggacccataataaaccccaggaagagtagattctgccttggtaggaactaatggggacccataataaaccccaggaagagtagctgctgccttggcaggaactaatggggatccataataaaccccatgaagagtagctgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagattctgccttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagctgctgccttggcaggaactaatggggatccataataaaccccatgaagagtagctgctgccttggcaggaactaatggggatccataataaaccccaggaagagtagattctgccttggcaggaactaatggggacccataataaaccccaggaagagtagattctgccttggcaggaactaatggggatccataataaaccccaggaagagtagattctgccttggtaggaactaatggggatccataataaaccccaggaagagtagattctgccttggcaggaactaatggggatccataataaaccccaggaagagtagattctgccttggcaggaactaatggggacccataataaaccccaggaagagtagattctgccttggtaggaactaatggggatctataataaaccccaggaagagtagattctgccttggtaggaactaatggggatccataataaaccccaggaagagtagattctg

Function

NR:

description
uncharacterized protein LOC100142646

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU391911 True 907 lncRNA 0.47 1 35178964 35179870

Neighbor

gene id symbol gene type direction distance location
LOC110522553 LOC106608207 coding upstream 208501 34930250 ~ 34970463 (+)
LOC110521087 LOC106608196 coding upstream 262538 34902850 ~ 34916426 (+)
LOC110522552 LOC106608197 coding upstream 278047 34893129 ~ 34900917 (+)
LOC110522546 LOC106608201 coding upstream 347683 34807607 ~ 34831281 (+)
rdh14b rdh14 coding upstream 548963 34627365 ~ 34630001 (+)
LOC110521089 LOC106608211 coding downstream 69747 35249617 ~ 35418424 (+)
LOC110521090 LOC106608213 coding downstream 382118 35561988 ~ 35723593 (+)
LOC110522555 LOC106608214 coding downstream 552222 35732092 ~ 35761259 (+)
LOC110522558 LOC106571671 coding downstream 624078 35803948 ~ 35819308 (+)
LOC118964470 NA coding downstream 703298 35883168 ~ 35884241 (+)
G346351 NA non-coding upstream 4775 35173780 ~ 35174189 (+)
G346350 NA non-coding upstream 15855 35162534 ~ 35163109 (+)
G346346 NA non-coding upstream 37766 35140987 ~ 35141198 (+)
G346342 NA non-coding upstream 63634 35109954 ~ 35115330 (+)
G346295 NA non-coding upstream 190136 34988142 ~ 34988828 (+)
G346353 NA non-coding downstream 67 35179937 ~ 35180250 (+)
G346360 NA non-coding downstream 9774 35189644 ~ 35190267 (+)
G346365 NA non-coding downstream 21905 35201775 ~ 35202027 (+)
G346369 NA non-coding downstream 27698 35207568 ~ 35208344 (+)
G346378 NA non-coding downstream 52685 35232555 ~ 35232821 (+)
G346334 NA other upstream 104626 35073939 ~ 35074338 (+)
LOC110522530 LOC106608164 other upstream 639504 34536950 ~ 34541410 (+)
LOC110522536 LOC105024319 other upstream 786701 34390869 ~ 34394175 (+)
LOC110522521 NA other upstream 1592653 33584945 ~ 33586386 (+)
G347151 NA other downstream 653499 35833369 ~ 35833844 (+)
G347178 NA other downstream 728376 35908246 ~ 35908451 (+)
LOC110522562 LOC105017690 other downstream 859296 36039096 ~ 36123362 (+)
G348133 NA other downstream 1980224 37160094 ~ 37161123 (+)
LOC110522576 LOC106608246 other downstream 2265597 37445368 ~ 37501952 (+)

Expression


Co-expression Network