G346979


Basic Information

Item Value
gene id G346979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 35517446 ~ 35517647 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU392580
ttaccaaatagggctatcttctgtacaccacccttaccttgtcacaacacaactgattggctcaaatgcattaaaagggaaagaaattccaattaacttttaacaaggcacacctgttgaagctggttgagagaatgccaagagtgtgcaaagctgtcatcaggctgtcatttgtttaacacttttttggttactacatgat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU392580 True 202 lncRNA 0.39 1 35517446 35517647

Neighbor

gene id symbol gene type direction distance location
LOC110521089 LOC106608211 coding upstream 99022 35249617 ~ 35418424 (+)
LOC110522553 LOC106608207 coding upstream 546983 34930250 ~ 34970463 (+)
LOC110521087 LOC106608196 coding upstream 601020 34902850 ~ 34916426 (+)
LOC110522552 LOC106608197 coding upstream 616529 34893129 ~ 34900917 (+)
LOC110522546 LOC106608201 coding upstream 686165 34807607 ~ 34831281 (+)
LOC110521090 LOC106608213 coding downstream 44341 35561988 ~ 35723593 (+)
LOC110522555 LOC106608214 coding downstream 214445 35732092 ~ 35761259 (+)
LOC110522558 LOC106571671 coding downstream 286301 35803948 ~ 35819308 (+)
LOC118964470 NA coding downstream 365521 35883168 ~ 35884241 (+)
LOC110522562 LOC105017690 coding downstream 521449 36039096 ~ 36123362 (+)
G346978 NA non-coding upstream 180 35517000 ~ 35517266 (+)
G346960 NA non-coding upstream 13240 35503970 ~ 35504206 (+)
G346919 NA non-coding upstream 39670 35477555 ~ 35477776 (+)
G346497 NA non-coding upstream 106522 35410490 ~ 35410924 (+)
G346381 NA non-coding upstream 280736 35236498 ~ 35236710 (+)
G346999 NA non-coding downstream 23791 35541438 ~ 35541735 (+)
G347049 NA non-coding downstream 83358 35601005 ~ 35601879 (+)
G347103 NA non-coding downstream 196596 35714243 ~ 35714720 (+)
G347104 NA non-coding downstream 197460 35715107 ~ 35715998 (+)
G347128 NA non-coding downstream 262727 35780374 ~ 35780720 (+)
G346334 NA other upstream 443108 35073939 ~ 35074338 (+)
LOC110522530 LOC106608164 other upstream 977986 34536950 ~ 34541410 (+)
LOC110522536 LOC105024319 other upstream 1125183 34390869 ~ 34394175 (+)
LOC110522521 NA other upstream 1931135 33584945 ~ 33586386 (+)
G347151 NA other downstream 315722 35833369 ~ 35833844 (+)
G347178 NA other downstream 390599 35908246 ~ 35908451 (+)
G348133 NA other downstream 1642447 37160094 ~ 37161123 (+)
LOC110522576 LOC106608246 other downstream 1927820 37445368 ~ 37501952 (+)

Expression


Co-expression Network