G347103


Basic Information

Item Value
gene id G347103
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 35714243 ~ 35714720 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU392726
AGTAGTGAATGGCCCACAGGACCTTAGACAGTAGTGAATGGCCCACAGGACCTTAGACAGTAGTGAAGGCGACGACAGTAGGGTAGGTGACGACAGTAGGCAAGGTGACGACAGTGGGGAAGGTGACGACAGTAGGCAAGGTGACGACAGTAGGGAAGGTGACGACAGTAGGCAAGGTGACGACAGTGGGGAAGGTGACGACAGTAGGGAAGGTGACGACAGTAGGCAAGGTGACGACAGTAGG

Function

NR:

description
transcription factor RFX3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU392726 True 244 lncRNA 0.55 2 35714243 35714720

Neighbor

gene id symbol gene type direction distance location
LOC110521089 LOC106608211 coding upstream 295819 35249617 ~ 35418424 (+)
LOC110522553 LOC106608207 coding upstream 743780 34930250 ~ 34970463 (+)
LOC110521087 LOC106608196 coding upstream 797817 34902850 ~ 34916426 (+)
LOC110522552 LOC106608197 coding upstream 813326 34893129 ~ 34900917 (+)
LOC110522546 LOC106608201 coding upstream 882962 34807607 ~ 34831281 (+)
LOC110522555 LOC106608214 coding downstream 17372 35732092 ~ 35761259 (+)
LOC110522558 LOC106571671 coding downstream 89228 35803948 ~ 35819308 (+)
LOC118964470 NA coding downstream 168448 35883168 ~ 35884241 (+)
LOC110522562 LOC105017690 coding downstream 324376 36039096 ~ 36123362 (+)
LOC110522563 LOC106608227 coding downstream 424236 36138956 ~ 36158325 (+)
G347049 NA non-coding upstream 112364 35601005 ~ 35601879 (+)
G346999 NA non-coding upstream 172508 35541438 ~ 35541735 (+)
G346979 NA non-coding upstream 196596 35517446 ~ 35517647 (+)
G346978 NA non-coding upstream 196977 35517000 ~ 35517266 (+)
G346960 NA non-coding upstream 210037 35503970 ~ 35504206 (+)
G347104 NA non-coding downstream 387 35715107 ~ 35715998 (+)
G347128 NA non-coding downstream 65654 35780374 ~ 35780720 (+)
G347142 NA non-coding downstream 82541 35797261 ~ 35800244 (+)
G347141 NA non-coding downstream 87097 35801817 ~ 35802060 (+)
G347153 NA non-coding downstream 124670 35839390 ~ 35839665 (+)
G346334 NA other upstream 639905 35073939 ~ 35074338 (+)
LOC110522530 LOC106608164 other upstream 1174783 34536950 ~ 34541410 (+)
LOC110522536 LOC105024319 other upstream 1321980 34390869 ~ 34394175 (+)
LOC110522521 NA other upstream 2127932 33584945 ~ 33586386 (+)
G347151 NA other downstream 118649 35833369 ~ 35833844 (+)
G347178 NA other downstream 193526 35908246 ~ 35908451 (+)
G348133 NA other downstream 1445374 37160094 ~ 37161123 (+)
LOC110522576 LOC106608246 other downstream 1730747 37445368 ~ 37501952 (+)

Expression


Co-expression Network