G347141


Basic Information

Item Value
gene id G347141
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 35801817 ~ 35802060 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU392764
TGGATAGGCAATTGCATGGCGAGAGAGATGGGGTTGTTTGGGAGGGAGTTTAGTCCCTCTGTGCTTCTTCCTGCTGTCCCACCTTGGGTTTTACCTCAACCACTGATAGATCTATGGTTGCTTGAGAGGGTAAGGGATGTTGAGGAAGGAGTAGATTAAGTTGTAAGTGAACATTTAATAACACAATACTATGCTCTCTTTAATAAATTCACAGATGGATCTAAGGACCCCAAAACAGGGAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU392764 True 244 lncRNA 0.44 1 35801817 35802060

Neighbor

gene id symbol gene type direction distance location
LOC110522555 LOC106608214 coding upstream 40558 35732092 ~ 35761259 (+)
LOC110521090 LOC106608213 coding upstream 78224 35561988 ~ 35723593 (+)
LOC110521089 LOC106608211 coding upstream 383393 35249617 ~ 35418424 (+)
LOC110522553 LOC106608207 coding upstream 831354 34930250 ~ 34970463 (+)
LOC110521087 LOC106608196 coding upstream 885391 34902850 ~ 34916426 (+)
LOC110522558 LOC106571671 coding downstream 1888 35803948 ~ 35819308 (+)
LOC118964470 NA coding downstream 81108 35883168 ~ 35884241 (+)
LOC110522562 LOC105017690 coding downstream 237036 36039096 ~ 36123362 (+)
LOC110522563 LOC106608227 coding downstream 336896 36138956 ~ 36158325 (+)
LOC110522575 NA coding downstream 1236495 37038555 ~ 37040052 (+)
G347142 NA non-coding upstream 1573 35797261 ~ 35800244 (+)
G347128 NA non-coding upstream 21097 35780374 ~ 35780720 (+)
G347104 NA non-coding upstream 85819 35715107 ~ 35715998 (+)
G347103 NA non-coding upstream 87097 35714243 ~ 35714720 (+)
G347049 NA non-coding upstream 199938 35601005 ~ 35601879 (+)
G347153 NA non-coding downstream 37330 35839390 ~ 35839665 (+)
G347155 NA non-coding downstream 39897 35841957 ~ 35842279 (+)
G347173 NA non-coding downstream 99041 35901101 ~ 35901315 (+)
G347177 NA non-coding downstream 105629 35907689 ~ 35907940 (+)
G346334 NA other upstream 727479 35073939 ~ 35074338 (+)
LOC110522546 LOC106608201 other upstream 979635 34807607 ~ 34831281 (+)
LOC110522530 LOC106608164 other upstream 1262357 34536950 ~ 34541410 (+)
LOC110522536 LOC105024319 other upstream 1409554 34390869 ~ 34394175 (+)
LOC110522521 NA other upstream 2215506 33584945 ~ 33586386 (+)
G347151 NA other downstream 31309 35833369 ~ 35833844 (+)
G347178 NA other downstream 106186 35908246 ~ 35908451 (+)
G348133 NA other downstream 1358034 37160094 ~ 37161123 (+)
LOC110522576 LOC106608246 other downstream 1643407 37445368 ~ 37501952 (+)

Expression


Co-expression Network