G347173


Basic Information

Item Value
gene id G347173
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 35901101 ~ 35901315 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU392797
ttcaatcccagcccagtacttcactggggccaagctccctgccatccaggacctctatatcaggcagtgtgaaaggaaggctcgaaaaaaaaaatggccaaagactccagccacccaagccatagactgttcactctgctactgtCCGGCAAACCGTACTGGAGCATCTGCTCTCAGACCAACAGGCTCCCGAGACAGCTTTTACCcacaagcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU392797 True 215 lncRNA 0.53 1 35901101 35901315

Neighbor

gene id symbol gene type direction distance location
LOC118964470 NA coding upstream 16861 35883168 ~ 35884241 (+)
LOC110522558 LOC106571671 coding upstream 81793 35803948 ~ 35819308 (+)
LOC110522555 LOC106608214 coding upstream 139842 35732092 ~ 35761259 (+)
LOC110521090 LOC106608213 coding upstream 177508 35561988 ~ 35723593 (+)
LOC110521089 LOC106608211 coding upstream 482677 35249617 ~ 35418424 (+)
LOC110522562 LOC105017690 coding downstream 137781 36039096 ~ 36123362 (+)
LOC110522563 LOC106608227 coding downstream 237641 36138956 ~ 36158325 (+)
LOC110522575 NA coding downstream 1137240 37038555 ~ 37040052 (+)
snw1 LOC106608236 coding downstream 1251709 37153024 ~ 37167042 (+)
LOC110517371 LOC106571681 coding downstream 1286695 37188010 ~ 37226273 (+)
G347155 NA non-coding upstream 58822 35841957 ~ 35842279 (+)
G347153 NA non-coding upstream 61436 35839390 ~ 35839665 (+)
G347141 NA non-coding upstream 99041 35801817 ~ 35802060 (+)
G347142 NA non-coding upstream 100857 35797261 ~ 35800244 (+)
G347177 NA non-coding downstream 6374 35907689 ~ 35907940 (+)
G347210 NA non-coding downstream 79833 35981148 ~ 35981926 (+)
G347233 NA non-coding downstream 224093 36125408 ~ 36128946 (+)
G347236 NA non-coding downstream 229134 36130449 ~ 36130907 (+)
G347604 NA non-coding downstream 232182 36133497 ~ 36133739 (+)
G347151 NA other upstream 67257 35833369 ~ 35833844 (+)
G346334 NA other upstream 826763 35073939 ~ 35074338 (+)
LOC110522546 LOC106608201 other upstream 1078919 34807607 ~ 34831281 (+)
LOC110522530 LOC106608164 other upstream 1361641 34536950 ~ 34541410 (+)
LOC110522536 LOC105024319 other upstream 1508838 34390869 ~ 34394175 (+)
G347178 NA other downstream 6931 35908246 ~ 35908451 (+)
G348133 NA other downstream 1258779 37160094 ~ 37161123 (+)
LOC110522576 LOC106608246 other downstream 1544152 37445368 ~ 37501952 (+)
G349855 NA other downstream 2503330 38404645 ~ 38405464 (+)

Expression


Co-expression Network