G347879


Basic Information

Item Value
gene id G347879
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 36638679 ~ 36639019 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU393588
cctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggccagttgagaacaagttctcatttgcaaatgtgacctggccaagataaagcaaagcagtgtgacacagacaacaacacagagttacacagagttacacaaacaataaacaagccaataacacaataaacaagtcaatgtacagctgcagcgatcgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU393588 True 242 lncRNA 0.41 2 36638679 36639019

Neighbor

gene id symbol gene type direction distance location
LOC110522563 LOC106608227 coding upstream 480354 36138956 ~ 36158325 (+)
LOC110522562 LOC105017690 coding upstream 515317 36039096 ~ 36123362 (+)
LOC118964470 NA coding upstream 754439 35883168 ~ 35884241 (+)
LOC110522558 LOC106571671 coding upstream 819371 35803948 ~ 35819308 (+)
LOC110522555 LOC106608214 coding upstream 877420 35732092 ~ 35761259 (+)
LOC110522575 NA coding downstream 399536 37038555 ~ 37040052 (+)
snw1 LOC106608236 coding downstream 514005 37153024 ~ 37167042 (+)
LOC110517371 LOC106571681 coding downstream 548991 37188010 ~ 37226273 (+)
LOC110522567 LOC106608238 coding downstream 632154 37271173 ~ 37283482 (+)
LOC110522568 LOC106571107 coding downstream 645242 37284261 ~ 37402023 (+)
G347851 NA non-coding upstream 55419 36581867 ~ 36583260 (+)
G347697 NA non-coding upstream 293936 36289173 ~ 36344743 (+)
G347684 NA non-coding upstream 393848 36244623 ~ 36244831 (+)
G347682 NA non-coding upstream 395449 36242990 ~ 36243230 (+)
G347678 NA non-coding upstream 403146 36235308 ~ 36235533 (+)
G347888 NA non-coding downstream 19029 36658048 ~ 36677707 (+)
G347887 NA non-coding downstream 19764 36658783 ~ 36677373 (+)
G347889 NA non-coding downstream 29160 36668179 ~ 36669525 (+)
G347912 NA non-coding downstream 59216 36698235 ~ 36699165 (+)
G347929 NA non-coding downstream 87300 36726319 ~ 36782249 (+)
G347178 NA other upstream 730228 35908246 ~ 35908451 (+)
G347151 NA other upstream 804835 35833369 ~ 35833844 (+)
G346334 NA other upstream 1564341 35073939 ~ 35074338 (+)
LOC110522546 LOC106608201 other upstream 1816497 34807607 ~ 34831281 (+)
G348133 NA other downstream 521075 37160094 ~ 37161123 (+)
LOC110522576 LOC106608246 other downstream 806448 37445368 ~ 37501952 (+)
G349855 NA other downstream 1765626 38404645 ~ 38405464 (+)
G349877 NA other downstream 1793160 38432179 ~ 38434024 (+)
LOC110522591 LOC105024333 other downstream 2251364 38890314 ~ 38897681 (+)

Expression


Co-expression Network