G347974


Basic Information

Item Value
gene id G347974
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 36848410 ~ 36849189 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU393698
GGGTAGTATAGAGTCATTTTATGGGGGTAGGGAAGAGTCCTGTTACAGTGGGTAGTATAGAGTCATTTTATGGGGGTAGGGAAGAGTCCTGTTACAGTAGGTAGTATAGAGTCATTTTATGGGGGTAGGGAGGAGTCCTGTTACAGTAGGTAGTATAGAGTCATTTTATGGGGGTAGGGAAGAGTCCTGTTACAGTGGGTAGTATAGAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU393698 True 210 lncRNA 0.44 2 36848410 36849189

Neighbor

gene id symbol gene type direction distance location
LOC110522563 LOC106608227 coding upstream 690085 36138956 ~ 36158325 (+)
LOC110522562 LOC105017690 coding upstream 725048 36039096 ~ 36123362 (+)
LOC118964470 NA coding upstream 964170 35883168 ~ 35884241 (+)
LOC110522558 LOC106571671 coding upstream 1029102 35803948 ~ 35819308 (+)
LOC110522555 LOC106608214 coding upstream 1087151 35732092 ~ 35761259 (+)
LOC110522575 NA coding downstream 189366 37038555 ~ 37040052 (+)
snw1 LOC106608236 coding downstream 303835 37153024 ~ 37167042 (+)
LOC110517371 LOC106571681 coding downstream 338821 37188010 ~ 37226273 (+)
LOC110522567 LOC106608238 coding downstream 421984 37271173 ~ 37283482 (+)
LOC110522568 LOC106571107 coding downstream 435072 37284261 ~ 37402023 (+)
G347960 NA non-coding upstream 13137 36819668 ~ 36835273 (+)
G347929 NA non-coding upstream 66161 36726319 ~ 36782249 (+)
G347939 NA non-coding upstream 93793 36753921 ~ 36754617 (+)
G347912 NA non-coding upstream 149245 36698235 ~ 36699165 (+)
G347888 NA non-coding upstream 170703 36658048 ~ 36677707 (+)
G348084 NA non-coding downstream 224074 37073263 ~ 37077812 (+)
G348131 NA non-coding downstream 307888 37157077 ~ 37157482 (+)
G348141 NA non-coding downstream 327168 37176357 ~ 37176560 (+)
G348143 NA non-coding downstream 330771 37179960 ~ 37180161 (+)
G348145 NA non-coding downstream 332000 37181189 ~ 37181392 (+)
G347178 NA other upstream 939959 35908246 ~ 35908451 (+)
G347151 NA other upstream 1014566 35833369 ~ 35833844 (+)
G346334 NA other upstream 1774072 35073939 ~ 35074338 (+)
LOC110522546 LOC106608201 other upstream 2026228 34807607 ~ 34831281 (+)
G348133 NA other downstream 310905 37160094 ~ 37161123 (+)
LOC110522576 LOC106608246 other downstream 596278 37445368 ~ 37501952 (+)
G349855 NA other downstream 1555456 38404645 ~ 38405464 (+)
G349877 NA other downstream 1582990 38432179 ~ 38434024 (+)
LOC110522591 LOC105024333 other downstream 2041194 38890314 ~ 38897681 (+)

Expression


Co-expression Network