G348084


Basic Information

Item Value
gene id G348084
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 37073263 ~ 37077812 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU393825
cccaattgagctagatctactgtctctattatattatgacagaccagctagatctacttcctctattatattatcacagagcagctagatctactttctctattatattatgaaagaccagctagatctactttctctattatattatgacagaccagctagatctactgcctctattataacatgacagaccagctagatctactgtctctatgtctctattatattatgacagaccagctagatctacggtctctattatattatgacagaccagctaaatctactgtctctattataatatgacagaccagctagatctactgtttctattatattatgacagaccagctagatatactgtctctatgatattatgacagaccagctagatctactgtctctattatattatgacagaccagctagatctaatgtctttattatattatgagagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtctctgtctctattatattatgacagaccagatggatctactgtctctattataatatgacagaccagctagatctactgtctctgttacattatgacagaccagctagatctactgtttctattatattatgacagaccagctagatatactgtctctatgatattatgacagtccagctagatctactgtctctattatattatgacagaccagctagatctaatgtctttattatattatgagagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtctctgtctctattatattatgacagaccagatggatctactgtctctattataatatgacagaccagctagatctactgtctctgttacattatgacagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtctctattatattatgagagaccagcctgatctactgtctctattatattatgacagaccagctagatctactgtctctgttacattatgacagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtctctattatattatgagagaccagcctgatctactgtctctattatattatgacagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtctctattatattatgagagaccagcctgatctactgtctctattatattatgacagaccagctagatctaatgtctctattatattatgacagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtctccattataatgtgacagaccagcatctgtagtatgacttaaagattgctgtgcaccagcggaacccatccaacttgaaggacctggagcagttttgccttgaagaatgggca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU393825 True 1489 lncRNA 0.36 2 37073263 37077812

Neighbor

gene id symbol gene type direction distance location
LOC110522575 NA coding upstream 33211 37038555 ~ 37040052 (+)
LOC110522563 LOC106608227 coding upstream 914938 36138956 ~ 36158325 (+)
LOC110522562 LOC105017690 coding upstream 949901 36039096 ~ 36123362 (+)
LOC118964470 NA coding upstream 1189023 35883168 ~ 35884241 (+)
LOC110522558 LOC106571671 coding upstream 1253955 35803948 ~ 35819308 (+)
snw1 LOC106608236 coding downstream 75212 37153024 ~ 37167042 (+)
LOC110517371 LOC106571681 coding downstream 110198 37188010 ~ 37226273 (+)
LOC110522567 LOC106608238 coding downstream 193361 37271173 ~ 37283482 (+)
LOC110522568 LOC106571107 coding downstream 206449 37284261 ~ 37402023 (+)
LOC110522576 LOC106608246 coding downstream 367556 37445368 ~ 37501952 (+)
G347974 NA non-coding upstream 224074 36848410 ~ 36849189 (+)
G347960 NA non-coding upstream 237990 36819668 ~ 36835273 (+)
G347929 NA non-coding upstream 291014 36726319 ~ 36782249 (+)
G347939 NA non-coding upstream 318646 36753921 ~ 36754617 (+)
G347912 NA non-coding upstream 374098 36698235 ~ 36699165 (+)
G348131 NA non-coding downstream 79265 37157077 ~ 37157482 (+)
G348141 NA non-coding downstream 98545 37176357 ~ 37176560 (+)
G348143 NA non-coding downstream 102148 37179960 ~ 37180161 (+)
G348145 NA non-coding downstream 103377 37181189 ~ 37181392 (+)
G348147 NA non-coding downstream 105022 37182834 ~ 37183064 (+)
G347178 NA other upstream 1164812 35908246 ~ 35908451 (+)
G347151 NA other upstream 1239419 35833369 ~ 35833844 (+)
G346334 NA other upstream 1998925 35073939 ~ 35074338 (+)
LOC110522546 LOC106608201 other upstream 2251081 34807607 ~ 34831281 (+)
G348133 NA other downstream 82282 37160094 ~ 37161123 (+)
G349855 NA other downstream 1326833 38404645 ~ 38405464 (+)
G349877 NA other downstream 1354367 38432179 ~ 38434024 (+)
LOC110522591 LOC105024333 other downstream 1812571 38890314 ~ 38897681 (+)

Expression


Co-expression Network