G348141


Basic Information

Item Value
gene id G348141
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 37176357 ~ 37176560 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU393886
CCTCGtatcctctctccttgcctccttctcaaaCCCCAGTGTATGAGAAAGCCAGAGTTTCcagcccctctgaccttctcctccaatggggtttgagaaggaggcaaggagagaggacacgaggaacatgcaattgagattctccccatCATGCCAATCTAATATTCCTCACCCATTCACTATTCCAGGTTACCTGTCTTGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU393886 True 204 lncRNA 0.50 1 37176357 37176560

Neighbor

gene id symbol gene type direction distance location
snw1 LOC106608236 coding upstream 9315 37153024 ~ 37167042 (+)
LOC110522575 NA coding upstream 136305 37038555 ~ 37040052 (+)
LOC110522563 LOC106608227 coding upstream 1018032 36138956 ~ 36158325 (+)
LOC110522562 LOC105017690 coding upstream 1052995 36039096 ~ 36123362 (+)
LOC118964470 NA coding upstream 1292117 35883168 ~ 35884241 (+)
LOC110517371 LOC106571681 coding downstream 11450 37188010 ~ 37226273 (+)
LOC110522567 LOC106608238 coding downstream 94613 37271173 ~ 37283482 (+)
LOC110522568 LOC106571107 coding downstream 107701 37284261 ~ 37402023 (+)
LOC110522576 LOC106608246 coding downstream 268808 37445368 ~ 37501952 (+)
LOC110522574 LOC106608248 coding downstream 346249 37522809 ~ 37524068 (+)
G348131 NA non-coding upstream 18875 37157077 ~ 37157482 (+)
G348084 NA non-coding upstream 98545 37073263 ~ 37077812 (+)
G347974 NA non-coding upstream 327168 36848410 ~ 36849189 (+)
G347960 NA non-coding upstream 341084 36819668 ~ 36835273 (+)
G347929 NA non-coding upstream 394108 36726319 ~ 36782249 (+)
G348143 NA non-coding downstream 3400 37179960 ~ 37180161 (+)
G348145 NA non-coding downstream 4629 37181189 ~ 37181392 (+)
G348147 NA non-coding downstream 6274 37182834 ~ 37183064 (+)
G348153 NA non-coding downstream 52233 37228793 ~ 37229063 (+)
G348154 NA non-coding downstream 53028 37229588 ~ 37230006 (+)
G348133 NA other upstream 15234 37160094 ~ 37161123 (+)
G347178 NA other upstream 1267906 35908246 ~ 35908451 (+)
G347151 NA other upstream 1342513 35833369 ~ 35833844 (+)
G346334 NA other upstream 2102019 35073939 ~ 35074338 (+)
G349855 NA other downstream 1228085 38404645 ~ 38405464 (+)
G349877 NA other downstream 1255619 38432179 ~ 38434024 (+)
LOC110522591 LOC105024333 other downstream 1713823 38890314 ~ 38897681 (+)
G350211 NA other downstream 1727170 38903730 ~ 38904774 (+)

Expression


Co-expression Network