G348143


Basic Information

Item Value
gene id G348143
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 37179960 ~ 37180161 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU393888
ctgaaagaaaatattgtacattttaaaaacaagaaaatggtgccatctgctttgcttcaaataaggaatttgaaatgatttatttaagtatatttttagcaattccatttacttttgatacttaactatacttaactatatttaaaaccaaccactgtttccaccactgtgtgtgtgtgttgtttaaaaacactgtttccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU393888 True 202 lncRNA 0.28 1 37179960 37180161

Neighbor

gene id symbol gene type direction distance location
snw1 LOC106608236 coding upstream 12918 37153024 ~ 37167042 (+)
LOC110522575 NA coding upstream 139908 37038555 ~ 37040052 (+)
LOC110522563 LOC106608227 coding upstream 1021635 36138956 ~ 36158325 (+)
LOC110522562 LOC105017690 coding upstream 1056598 36039096 ~ 36123362 (+)
LOC118964470 NA coding upstream 1295720 35883168 ~ 35884241 (+)
LOC110517371 LOC106571681 coding downstream 7849 37188010 ~ 37226273 (+)
LOC110522567 LOC106608238 coding downstream 91012 37271173 ~ 37283482 (+)
LOC110522568 LOC106571107 coding downstream 104100 37284261 ~ 37402023 (+)
LOC110522576 LOC106608246 coding downstream 265207 37445368 ~ 37501952 (+)
LOC110522574 LOC106608248 coding downstream 342648 37522809 ~ 37524068 (+)
G348141 NA non-coding upstream 3400 37176357 ~ 37176560 (+)
G348131 NA non-coding upstream 22478 37157077 ~ 37157482 (+)
G348084 NA non-coding upstream 102148 37073263 ~ 37077812 (+)
G347974 NA non-coding upstream 330771 36848410 ~ 36849189 (+)
G347960 NA non-coding upstream 344687 36819668 ~ 36835273 (+)
G348145 NA non-coding downstream 1028 37181189 ~ 37181392 (+)
G348147 NA non-coding downstream 2673 37182834 ~ 37183064 (+)
G348153 NA non-coding downstream 48632 37228793 ~ 37229063 (+)
G348154 NA non-coding downstream 49427 37229588 ~ 37230006 (+)
G348155 NA non-coding downstream 49935 37230096 ~ 37231456 (+)
G348133 NA other upstream 18837 37160094 ~ 37161123 (+)
G347178 NA other upstream 1271509 35908246 ~ 35908451 (+)
G347151 NA other upstream 1346116 35833369 ~ 35833844 (+)
G346334 NA other upstream 2105622 35073939 ~ 35074338 (+)
G349855 NA other downstream 1224484 38404645 ~ 38405464 (+)
G349877 NA other downstream 1252018 38432179 ~ 38434024 (+)
LOC110522591 LOC105024333 other downstream 1710222 38890314 ~ 38897681 (+)
G350211 NA other downstream 1723569 38903730 ~ 38904774 (+)

Expression


Co-expression Network