G348145


Basic Information

Item Value
gene id G348145
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 37181189 ~ 37181392 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU393890
ggtgaatcggCAGGATATTTAAGTCCCttagaacagggtatggtagtaggtgccaggcgcaccggtttgtgtcaagaactttaACGCTACTGGGTATTTCAGGCTCAAAAgtgtcccgtgtgtatcaagaatggtcctccacccaagggacattcagccaacttgacacgtCCGTGGAAactattggagtcaacatgggccagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU393890 True 204 lncRNA 0.50 1 37181189 37181392

Neighbor

gene id symbol gene type direction distance location
snw1 LOC106608236 coding upstream 14147 37153024 ~ 37167042 (+)
LOC110522575 NA coding upstream 141137 37038555 ~ 37040052 (+)
LOC110522563 LOC106608227 coding upstream 1022864 36138956 ~ 36158325 (+)
LOC110522562 LOC105017690 coding upstream 1057827 36039096 ~ 36123362 (+)
LOC118964470 NA coding upstream 1296949 35883168 ~ 35884241 (+)
LOC110517371 LOC106571681 coding downstream 6618 37188010 ~ 37226273 (+)
LOC110522567 LOC106608238 coding downstream 89781 37271173 ~ 37283482 (+)
LOC110522568 LOC106571107 coding downstream 102869 37284261 ~ 37402023 (+)
LOC110522576 LOC106608246 coding downstream 263976 37445368 ~ 37501952 (+)
LOC110522574 LOC106608248 coding downstream 341417 37522809 ~ 37524068 (+)
G348143 NA non-coding upstream 1028 37179960 ~ 37180161 (+)
G348141 NA non-coding upstream 4629 37176357 ~ 37176560 (+)
G348131 NA non-coding upstream 23707 37157077 ~ 37157482 (+)
G348084 NA non-coding upstream 103377 37073263 ~ 37077812 (+)
G347974 NA non-coding upstream 332000 36848410 ~ 36849189 (+)
G348147 NA non-coding downstream 1442 37182834 ~ 37183064 (+)
G348153 NA non-coding downstream 47401 37228793 ~ 37229063 (+)
G348154 NA non-coding downstream 48196 37229588 ~ 37230006 (+)
G348155 NA non-coding downstream 48704 37230096 ~ 37231456 (+)
G348156 NA non-coding downstream 50324 37231716 ~ 37231978 (+)
G348133 NA other upstream 20066 37160094 ~ 37161123 (+)
G347178 NA other upstream 1272738 35908246 ~ 35908451 (+)
G347151 NA other upstream 1347345 35833369 ~ 35833844 (+)
G346334 NA other upstream 2106851 35073939 ~ 35074338 (+)
G349855 NA other downstream 1223253 38404645 ~ 38405464 (+)
G349877 NA other downstream 1250787 38432179 ~ 38434024 (+)
LOC110522591 LOC105024333 other downstream 1708991 38890314 ~ 38897681 (+)
G350211 NA other downstream 1722338 38903730 ~ 38904774 (+)

Expression


Co-expression Network