G348155


Basic Information

Item Value
gene id G348155
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 37230096 ~ 37231456 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU393900
CTTCAAACGAGCCAGAAAATGTCTTTATATTAATCGTTGTATTTGTCACGACATTTTTTCactgaaatacaataaaaaatatcAAAGGATATACAGACACTTGATATAGTCACTGTTGGGAGTGGTCCTGTCGTGCCGACGTCACCGTGGCGCCAGTGTCTGTCCGTAGTAGAGTTGCAACATTCCTGAAACTTCCTGAATTCCTGAAAATCCCGGTTGAAGAATTCCAGGTTGGATGATTCCTCTCGCAGCATTTCTGATTCCAGAAATTCTCAGCATTTCAGAGAAACCTGGGAAAGTTGTCAGATTTTTTTGCAACCTTAGTCCGTAATAGTGCACCATGTGGGTTTTAGAAAACGGACAATAAATACTGTACAATGCGGTAGTAACACTAGTTTAGGAAATCACAAAAGATCAACCATGCTTTTAAACAGAAACTCACATGATAACATACTTTACAAATGAACAATGCAGCATTTCTGCCAAGTCATCCCTTCACAATTATAATATATAAACGTGGGTATATATGCTTACACACCATCGTTTGTGGTTTTTATACATTAAATAAAAGGCCTTCTTTACATGTCATTCCAAAACTAGATTTCCCGATAAAGGTTTGGAGCGTAAACATTAAGACTATAGGTGTTCCCTCTATAATGAAGCCTTTGCCAATACAACACAGCAACGCAAAAAGCTATTTAAATGGAATTACATTAATTGAAAGACTACATTAAAGACTACATGCCAAATAACGCACAAAGAGAGTAATTTTAAGTGTATTTATCCACTACCCATTTTCCTCTGCAGTTTCCATTTCCCTAACATGTACCATTTATGTGAATGAGCATTCTGAACCACTGGGTCCCGATACTTCTCCACTGTTGAGGTACATGTAAAAATGGACTATATTCTCTAACAACTTGAGTTCCCCTGAGAAAACTGTAGAAACATACATGATTGAAGGTTATCAAGCTGTCATTGTTGAGACTGTGGATCATAAATTCAGTCCAGACCAGATCACGCCACCTTGTAAGAACATCTGGTATGCATGTTATCATGAATTACCATGAATTGCTGGAGGTTGTTGTTCTTGTTTGTCAAGATCTTTAGACCCAATTCTCTCCTCAgccataaatatatattttaaagaagAATCGCTCAAATTCATGCACGTTAGTGCAACGATATGTAGATTCCTCGCCAGTCCCTATCACATCTGAAGTATATTCTCTTAGCAGCATCGTTAAGACTTTTCAATTGGCCAAGACATGTTCCGTCTCACCATTCCCCTCTTCAAAATAAGATTTACCACAGTATCAAACATCTCACATAGCAAAATCATACAAGGAAGTACGTTAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU393900 True 1361 lncRNA 0.38 1 37230096 37231456

Neighbor

gene id symbol gene type direction distance location
LOC110517371 LOC106571681 coding upstream 3823 37188010 ~ 37226273 (+)
snw1 LOC106608236 coding upstream 63054 37153024 ~ 37167042 (+)
LOC110522575 NA coding upstream 190044 37038555 ~ 37040052 (+)
LOC110522563 LOC106608227 coding upstream 1071771 36138956 ~ 36158325 (+)
LOC110522562 LOC105017690 coding upstream 1106734 36039096 ~ 36123362 (+)
LOC110522567 LOC106608238 coding downstream 39717 37271173 ~ 37283482 (+)
LOC110522568 LOC106571107 coding downstream 52805 37284261 ~ 37402023 (+)
LOC110522576 LOC106608246 coding downstream 213912 37445368 ~ 37501952 (+)
LOC110522574 LOC106608248 coding downstream 291353 37522809 ~ 37524068 (+)
LOC118964471 NA coding downstream 616523 37847979 ~ 37855029 (+)
G348154 NA non-coding upstream 90 37229588 ~ 37230006 (+)
G348153 NA non-coding upstream 1033 37228793 ~ 37229063 (+)
G348147 NA non-coding upstream 47032 37182834 ~ 37183064 (+)
G348145 NA non-coding upstream 48704 37181189 ~ 37181392 (+)
G348143 NA non-coding upstream 49935 37179960 ~ 37180161 (+)
G348156 NA non-coding downstream 260 37231716 ~ 37231978 (+)
G348157 NA non-coding downstream 556 37232012 ~ 37232383 (+)
G348158 NA non-coding downstream 1688 37233144 ~ 37233554 (+)
G348159 NA non-coding downstream 2388 37233844 ~ 37234431 (+)
G348161 NA non-coding downstream 5431 37236887 ~ 37237277 (+)
G348133 NA other upstream 68973 37160094 ~ 37161123 (+)
G347178 NA other upstream 1321645 35908246 ~ 35908451 (+)
G347151 NA other upstream 1396252 35833369 ~ 35833844 (+)
G346334 NA other upstream 2155758 35073939 ~ 35074338 (+)
G349855 NA other downstream 1173189 38404645 ~ 38405464 (+)
G349877 NA other downstream 1200723 38432179 ~ 38434024 (+)
LOC110522591 LOC105024333 other downstream 1658927 38890314 ~ 38897681 (+)
G350211 NA other downstream 1672274 38903730 ~ 38904774 (+)

Expression


Co-expression Network