G348165


Basic Information

Item Value
gene id G348165
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 37246288 ~ 37246489 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU393910
CTATTTATTCAATGTGAAAGTAGTTACCGTCTTGTTCTGCTGaacttggcattcatgccaagtAGAACCTCCTCACCACAGAATGGAATCAAGATAAAGGATCTCTATAATCACTGCTCTTCCCTGCTTTACCAGGGAGCAATGCATTGTTGGTAgagcatatatatacagtgccttgcggaagtattcggcccccttgacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU393910 True 202 lncRNA 0.44 1 37246288 37246489

Neighbor

gene id symbol gene type direction distance location
LOC110517371 LOC106571681 coding upstream 20015 37188010 ~ 37226273 (+)
snw1 LOC106608236 coding upstream 79246 37153024 ~ 37167042 (+)
LOC110522575 NA coding upstream 206236 37038555 ~ 37040052 (+)
LOC110522563 LOC106608227 coding upstream 1087963 36138956 ~ 36158325 (+)
LOC110522562 LOC105017690 coding upstream 1122926 36039096 ~ 36123362 (+)
LOC110522567 LOC106608238 coding downstream 24684 37271173 ~ 37283482 (+)
LOC110522568 LOC106571107 coding downstream 37772 37284261 ~ 37402023 (+)
LOC110522576 LOC106608246 coding downstream 198879 37445368 ~ 37501952 (+)
LOC110522574 LOC106608248 coding downstream 276320 37522809 ~ 37524068 (+)
LOC118964471 NA coding downstream 601490 37847979 ~ 37855029 (+)
G348163 NA non-coding upstream 773 37245265 ~ 37245515 (+)
G348161 NA non-coding upstream 9011 37236887 ~ 37237277 (+)
G348159 NA non-coding upstream 11857 37233844 ~ 37234431 (+)
G348158 NA non-coding upstream 12734 37233144 ~ 37233554 (+)
G348157 NA non-coding upstream 13905 37232012 ~ 37232383 (+)
G348166 NA non-coding downstream 555 37247044 ~ 37247380 (+)
G348168 NA non-coding downstream 2091 37248580 ~ 37248787 (+)
G348173 NA non-coding downstream 8207 37254696 ~ 37254902 (+)
G348176 NA non-coding downstream 50325 37296814 ~ 37302113 (+)
G348175 NA non-coding downstream 51994 37298483 ~ 37299323 (+)
G348133 NA other upstream 85165 37160094 ~ 37161123 (+)
G347178 NA other upstream 1337837 35908246 ~ 35908451 (+)
G347151 NA other upstream 1412444 35833369 ~ 35833844 (+)
G346334 NA other upstream 2171950 35073939 ~ 35074338 (+)
G349855 NA other downstream 1158156 38404645 ~ 38405464 (+)
G349877 NA other downstream 1185690 38432179 ~ 38434024 (+)
LOC110522591 LOC105024333 other downstream 1643894 38890314 ~ 38897681 (+)
G350211 NA other downstream 1657241 38903730 ~ 38904774 (+)

Expression


Co-expression Network