G348220


Basic Information

Item Value
gene id G348220
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 37334795 ~ 37336753 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU393986
ggatatataaggagaggcagagggagagagatgtataataagagggagagagatatataaggttagggagagagagatataaggagagggagagagatatataaggagagggagagggagagagatgtataatgagagggagagagatatataaggttagggagagagagatataatgagagggagagagatatataaggttagggagagagatataaggagagggagagagatatataaggttagggagagagatataaggagagggagagagatatataaggttagggagagagatataaggagagggagagagatatataaggagagggagagagatttataaggagagggagagggagagagatggagagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU393986 True 375 lncRNA 0.42 2 37334795 37336753

Neighbor

gene id symbol gene type direction distance location
LOC110522567 LOC106608238 coding upstream 51313 37271173 ~ 37283482 (+)
LOC110517371 LOC106571681 coding upstream 108522 37188010 ~ 37226273 (+)
snw1 LOC106608236 coding upstream 167753 37153024 ~ 37167042 (+)
LOC110522575 NA coding upstream 294743 37038555 ~ 37040052 (+)
LOC110522563 LOC106608227 coding upstream 1176470 36138956 ~ 36158325 (+)
LOC110522576 LOC106608246 coding downstream 108615 37445368 ~ 37501952 (+)
LOC110522574 LOC106608248 coding downstream 186056 37522809 ~ 37524068 (+)
LOC118964471 NA coding downstream 511226 37847979 ~ 37855029 (+)
actc1a LOC105024319 coding downstream 533999 37870752 ~ 37878518 (+)
LOC110521098 LOC106608260 coding downstream 542649 37879402 ~ 37897524 (+)
G348176 NA non-coding upstream 32682 37296814 ~ 37302113 (+)
G348175 NA non-coding upstream 35472 37298483 ~ 37299323 (+)
G348173 NA non-coding upstream 79893 37254696 ~ 37254902 (+)
G348168 NA non-coding upstream 86008 37248580 ~ 37248787 (+)
G348166 NA non-coding upstream 87415 37247044 ~ 37247380 (+)
G348193 NA non-coding downstream 19411 37356164 ~ 37428991 (+)
G348232 NA non-coding downstream 22678 37359431 ~ 37359778 (+)
G348234 NA non-coding downstream 24828 37361581 ~ 37362524 (+)
G348267 NA non-coding downstream 103612 37440365 ~ 37441506 (+)
G348266 NA non-coding downstream 104305 37441058 ~ 37509205 (+)
G348133 NA other upstream 173672 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 1261839 36039096 ~ 36123362 (+)
G347178 NA other upstream 1426344 35908246 ~ 35908451 (+)
G347151 NA other upstream 1500951 35833369 ~ 35833844 (+)
G346334 NA other upstream 2260457 35073939 ~ 35074338 (+)
G349855 NA other downstream 1067892 38404645 ~ 38405464 (+)
G349877 NA other downstream 1095426 38432179 ~ 38434024 (+)
LOC110522591 LOC105024333 other downstream 1553630 38890314 ~ 38897681 (+)
G350211 NA other downstream 1566977 38903730 ~ 38904774 (+)

Expression


Co-expression Network