G348232


Basic Information

Item Value
gene id G348232
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 37359431 ~ 37359778 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU393999
CCATAacagactgttactgtgtttgCTTGAGGTTGTCCTTGACATCCATAACAGACTGTTCCCGTGTTTGCTTGAGGTTGTCCTTGACATCCATGacagactgttactgtgtttaCTTGAGGTTGTCCTTGACATCCATAacagactgttactgtgtttgCTTGAGGTTGTCCTTGACATCCATAACAGACTGTTCCCGTGTTTGCTTGAGGTTGTCCTTGACATCCATGacagactgttactgtgtttgCTTGAGGT

Function

NR:

description
PREDICTED: dentin sialophosphoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU393999 True 258 lncRNA 0.44 2 37359431 37359778

Neighbor

gene id symbol gene type direction distance location
LOC110522567 LOC106608238 coding upstream 75949 37271173 ~ 37283482 (+)
LOC110517371 LOC106571681 coding upstream 133158 37188010 ~ 37226273 (+)
snw1 LOC106608236 coding upstream 192389 37153024 ~ 37167042 (+)
LOC110522575 NA coding upstream 319379 37038555 ~ 37040052 (+)
LOC110522563 LOC106608227 coding upstream 1201106 36138956 ~ 36158325 (+)
LOC110522576 LOC106608246 coding downstream 85590 37445368 ~ 37501952 (+)
LOC110522574 LOC106608248 coding downstream 163031 37522809 ~ 37524068 (+)
LOC118964471 NA coding downstream 488201 37847979 ~ 37855029 (+)
actc1a LOC105024319 coding downstream 510974 37870752 ~ 37878518 (+)
LOC110521098 LOC106608260 coding downstream 519624 37879402 ~ 37897524 (+)
G348220 NA non-coding upstream 22678 37334795 ~ 37336753 (+)
G348176 NA non-coding upstream 57318 37296814 ~ 37302113 (+)
G348175 NA non-coding upstream 60108 37298483 ~ 37299323 (+)
G348173 NA non-coding upstream 104529 37254696 ~ 37254902 (+)
G348168 NA non-coding upstream 110644 37248580 ~ 37248787 (+)
G348234 NA non-coding downstream 1803 37361581 ~ 37362524 (+)
G348267 NA non-coding downstream 80587 37440365 ~ 37441506 (+)
G348266 NA non-coding downstream 81280 37441058 ~ 37509205 (+)
G348287 NA non-coding downstream 129621 37489399 ~ 37489902 (+)
G348133 NA other upstream 198308 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 1286475 36039096 ~ 36123362 (+)
G347178 NA other upstream 1450980 35908246 ~ 35908451 (+)
G347151 NA other upstream 1525587 35833369 ~ 35833844 (+)
G346334 NA other upstream 2285093 35073939 ~ 35074338 (+)
G349855 NA other downstream 1044867 38404645 ~ 38405464 (+)
G349877 NA other downstream 1072401 38432179 ~ 38434024 (+)
LOC110522591 LOC105024333 other downstream 1530605 38890314 ~ 38897681 (+)
G350211 NA other downstream 1543952 38903730 ~ 38904774 (+)

Expression


Co-expression Network