G348295


Basic Information

Item Value
gene id G348295
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 37517878 ~ 37518424 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU394072
ccaccactgtgacctgtatgctctagtcgactggccctcgctacatattcgtcgtcaGACCAACTGGCACCAAGGCAtttataagtctatgctaggtaaagctccgccttatctcagttcactggtcacgataacaacacccacccgtagcacacgttccagcaggtatatctcacggatcatccccaaagccaacacctcatttggtctcctttccttccagttctctgctgccagtgactggaacgaattgcaaaaatcgctgaagttggagacttttatttccctcaccaactttaaacatcagctatctgagcagctaaccgatcgctgcagctgtacatagtccatctgtaaataacccacccaatctacctacctcatccccatactgtttttattttatttacttttctgctcttttgcacaccagtatctctacttgcacatcatcatctgctcatctatcactccagtgttaatctgataaattgtaattattcgctccaatggcctatttattgctgacctcctcatgccttttgca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU394072 True 547 lncRNA 0.45 1 37517878 37518424

Neighbor

gene id symbol gene type direction distance location
LOC110522576 LOC106608246 coding upstream 15926 37445368 ~ 37501952 (+)
LOC110522568 LOC106571107 coding upstream 115855 37284261 ~ 37402023 (+)
LOC110522567 LOC106608238 coding upstream 234396 37271173 ~ 37283482 (+)
LOC110517371 LOC106571681 coding upstream 291605 37188010 ~ 37226273 (+)
snw1 LOC106608236 coding upstream 350836 37153024 ~ 37167042 (+)
LOC110522574 LOC106608248 coding downstream 4385 37522809 ~ 37524068 (+)
LOC118964471 NA coding downstream 329555 37847979 ~ 37855029 (+)
actc1a LOC105024319 coding downstream 352328 37870752 ~ 37878518 (+)
LOC110521098 LOC106608260 coding downstream 360978 37879402 ~ 37897524 (+)
LOC110522584 LOC106608258 coding downstream 379212 37897636 ~ 37899208 (+)
G348293 NA non-coding upstream 1664 37515831 ~ 37516214 (+)
G348266 NA non-coding upstream 8673 37441058 ~ 37509205 (+)
G348287 NA non-coding upstream 27976 37489399 ~ 37489902 (+)
G348267 NA non-coding upstream 76372 37440365 ~ 37441506 (+)
G348302 NA non-coding downstream 12738 37531162 ~ 37531455 (+)
G348308 NA non-coding downstream 27722 37546146 ~ 37546352 (+)
G348320 NA non-coding downstream 52417 37570841 ~ 37571226 (+)
G348323 NA non-coding downstream 67005 37585429 ~ 37593367 (+)
G348335 NA non-coding downstream 87509 37605933 ~ 37651426 (+)
G348133 NA other upstream 356755 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 1444922 36039096 ~ 36123362 (+)
G347178 NA other upstream 1609427 35908246 ~ 35908451 (+)
G347151 NA other upstream 1684034 35833369 ~ 35833844 (+)
G349855 NA other downstream 886221 38404645 ~ 38405464 (+)
G349877 NA other downstream 913755 38432179 ~ 38434024 (+)
LOC110522591 LOC105024333 other downstream 1371959 38890314 ~ 38897681 (+)
G350211 NA other downstream 1385306 38903730 ~ 38904774 (+)
G350665 NA other downstream 1869717 39388141 ~ 39389474 (+)

Expression


Co-expression Network