G348302


Basic Information

Item Value
gene id G348302
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 37531162 ~ 37531455 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU394079
gtggccgttcaggttatgtcaatatagtaAACTcattgttattgaccaaatacgtattttccaccataatttgcaaataaattcattaaaaatcctacaatgtgattttctggattttttttctcattttgtctgtcatagttgaagtgaacctatgatgaaaattacaggcatctctcatctttttaagtgggacaacttgcacaattggtggctgactaaatacttttttgtcccactgtaggtatatacactgctcaaagaaaattaagggaacactaaaataacacatcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU394079 True 294 lncRNA 0.33 1 37531162 37531455

Neighbor

gene id symbol gene type direction distance location
LOC110522574 LOC106608248 coding upstream 7094 37522809 ~ 37524068 (+)
LOC110522576 LOC106608246 coding upstream 29210 37445368 ~ 37501952 (+)
LOC110522568 LOC106571107 coding upstream 129139 37284261 ~ 37402023 (+)
LOC110522567 LOC106608238 coding upstream 247680 37271173 ~ 37283482 (+)
LOC110517371 LOC106571681 coding upstream 304889 37188010 ~ 37226273 (+)
LOC118964471 NA coding downstream 316524 37847979 ~ 37855029 (+)
actc1a LOC105024319 coding downstream 339297 37870752 ~ 37878518 (+)
LOC110521098 LOC106608260 coding downstream 347947 37879402 ~ 37897524 (+)
LOC110522584 LOC106608258 coding downstream 366181 37897636 ~ 37899208 (+)
LOC110521100 LOC106608253 coding downstream 438267 37969722 ~ 38234678 (+)
G348295 NA non-coding upstream 12738 37517878 ~ 37518424 (+)
G348293 NA non-coding upstream 14948 37515831 ~ 37516214 (+)
G348266 NA non-coding upstream 21957 37441058 ~ 37509205 (+)
G348287 NA non-coding upstream 41260 37489399 ~ 37489902 (+)
G348308 NA non-coding downstream 14691 37546146 ~ 37546352 (+)
G348320 NA non-coding downstream 39386 37570841 ~ 37571226 (+)
G348323 NA non-coding downstream 53974 37585429 ~ 37593367 (+)
G348335 NA non-coding downstream 74478 37605933 ~ 37651426 (+)
G349173 NA non-coding downstream 142077 37673532 ~ 37674468 (+)
G348133 NA other upstream 370039 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 1458206 36039096 ~ 36123362 (+)
G347178 NA other upstream 1622711 35908246 ~ 35908451 (+)
G347151 NA other upstream 1697318 35833369 ~ 35833844 (+)
G349855 NA other downstream 873190 38404645 ~ 38405464 (+)
G349877 NA other downstream 900724 38432179 ~ 38434024 (+)
LOC110522591 LOC105024333 other downstream 1358928 38890314 ~ 38897681 (+)
G350211 NA other downstream 1372275 38903730 ~ 38904774 (+)
G350665 NA other downstream 1856686 39388141 ~ 39389474 (+)

Expression


Co-expression Network