G348320


Basic Information

Item Value
gene id G348320
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 37570841 ~ 37571226 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU394100
gtccagtgttgtgtctggtatagggtccagtccagtgttgtgtctggtacagggtccagtccagtgttgtgtctggtatagggtccagtccagtgttgtgtctggtatagggtccagtccagtgttgtgtctggtacagggtccagtccagtgttgtgtctggtatagggtccagtccagtgttgtgtctggtatagggtccagtccagtgttgtgtctggtacagggtccagtccagtgttgtgtctggtacagggtccagtccagtgttgtgtctggtacagggtccagtccagtgttgtgtctggtacagggtccagtccagtgttgtgtctggtatagggcccagtccagtgttgtgtctggtacagggtccagtccagtgt

Function

NR:

description
PREDICTED: uncharacterized protein LOC106593258

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU394100 True 386 lncRNA 0.54 1 37570841 37571226

Neighbor

gene id symbol gene type direction distance location
LOC110522574 LOC106608248 coding upstream 46773 37522809 ~ 37524068 (+)
LOC110522576 LOC106608246 coding upstream 68889 37445368 ~ 37501952 (+)
LOC110522568 LOC106571107 coding upstream 168818 37284261 ~ 37402023 (+)
LOC110522567 LOC106608238 coding upstream 287359 37271173 ~ 37283482 (+)
LOC110517371 LOC106571681 coding upstream 344568 37188010 ~ 37226273 (+)
LOC118964471 NA coding downstream 276753 37847979 ~ 37855029 (+)
actc1a LOC105024319 coding downstream 299526 37870752 ~ 37878518 (+)
LOC110521098 LOC106608260 coding downstream 308176 37879402 ~ 37897524 (+)
LOC110522584 LOC106608258 coding downstream 326410 37897636 ~ 37899208 (+)
LOC110521100 LOC106608253 coding downstream 398496 37969722 ~ 38234678 (+)
G348308 NA non-coding upstream 24489 37546146 ~ 37546352 (+)
G348302 NA non-coding upstream 39386 37531162 ~ 37531455 (+)
G348295 NA non-coding upstream 52417 37517878 ~ 37518424 (+)
G348293 NA non-coding upstream 54627 37515831 ~ 37516214 (+)
G348323 NA non-coding downstream 14203 37585429 ~ 37593367 (+)
G348335 NA non-coding downstream 34707 37605933 ~ 37651426 (+)
G349173 NA non-coding downstream 102306 37673532 ~ 37674468 (+)
G349185 NA non-coding downstream 125286 37696512 ~ 37696744 (+)
G349215 NA non-coding downstream 153157 37724383 ~ 37724644 (+)
G348133 NA other upstream 409718 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 1497885 36039096 ~ 36123362 (+)
G347178 NA other upstream 1662390 35908246 ~ 35908451 (+)
G347151 NA other upstream 1736997 35833369 ~ 35833844 (+)
G349855 NA other downstream 833419 38404645 ~ 38405464 (+)
G349877 NA other downstream 860953 38432179 ~ 38434024 (+)
LOC110522591 LOC105024333 other downstream 1319157 38890314 ~ 38897681 (+)
G350211 NA other downstream 1332504 38903730 ~ 38904774 (+)
G350665 NA other downstream 1816915 39388141 ~ 39389474 (+)

Expression


Co-expression Network