G349497


Basic Information

Item Value
gene id G349497
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38277459 ~ 38278479 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU395437
taaagtttagtagagtacagtagagcacagtacagtagcgTACagtagcacagtacagtagagtttagtagagtagagcacagtagagtacagtagagcacagtagagtagagcacagtaaagtacagtagagcacagtagagtacagtagagcacagtagagtttagtagagtacagtacagtatagcttAGTAGCGTACAGTGGAGCTTAGTAGAGCCCAGTAGAGtttagtagagcacagtagagtttaGTAGAGTATATTAGAGTTTAGtaaagtacagcacagtagagcttagagtacagtagagtacagtagagcacagccgagtagagtacagtagagtacagtacagcacagtacagtagagtttactagagtacagtaaagtttactagagtacagcacagcacagtagagcttagagtacagtagagtacagtttagtagagtacagtagagtacagtttagtagagtacagtagagcacagcacagtagagtacagtagagtagactagtacagtagagtagagtttactagagtacagtagagtttactagtacagtacagcagactaGAGTTTACTAGAGtaaagtagaatagagtacagtagag

Function

NR:

description
PREDICTED: repetitive proline-rich cell wall protein 2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU395437 True 618 lncRNA 0.40 2 38277459 38278479

Neighbor

gene id symbol gene type direction distance location
LOC110521100 LOC106608253 coding upstream 42781 37969722 ~ 38234678 (+)
LOC110522584 LOC106608258 coding upstream 378251 37897636 ~ 37899208 (+)
LOC110521098 LOC106608260 coding upstream 379935 37879402 ~ 37897524 (+)
actc1a LOC105024319 coding upstream 398941 37870752 ~ 37878518 (+)
LOC118964471 NA coding upstream 422430 37847979 ~ 37855029 (+)
LOC110522580 LOC106608254 coding downstream 9718 38288197 ~ 38291538 (+)
thbs1b LOC106608163 coding downstream 347737 38626216 ~ 38651062 (+)
LOC110522590 NA coding downstream 539421 38817900 ~ 38820524 (+)
LOC118964474 LOC106608159 coding downstream 547304 38825783 ~ 38885772 (+)
LOC110522591 LOC105024333 coding downstream 611835 38890314 ~ 38897681 (+)
G349456 NA non-coding upstream 101133 38175489 ~ 38176326 (+)
G349446 NA non-coding upstream 134186 38142289 ~ 38143273 (+)
G349440 NA non-coding upstream 155028 38121386 ~ 38122431 (+)
G349418 NA non-coding upstream 224375 38052576 ~ 38053084 (+)
G349417 NA non-coding upstream 226300 38050357 ~ 38051159 (+)
G349528 NA non-coding downstream 74217 38352696 ~ 38362145 (+)
G349529 NA non-coding downstream 74945 38353424 ~ 38355731 (+)
G349530 NA non-coding downstream 75838 38354317 ~ 38361596 (+)
G349531 NA non-coding downstream 76389 38354868 ~ 38363027 (+)
G349533 NA non-coding downstream 84890 38363369 ~ 38364394 (+)
LOC110522576 LOC106608246 other upstream 780453 37445368 ~ 37501952 (+)
G348133 NA other upstream 1116336 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 2204503 36039096 ~ 36123362 (+)
G347178 NA other upstream 2369008 35908246 ~ 35908451 (+)
G347151 NA other upstream 2443615 35833369 ~ 35833844 (+)
G349855 NA other downstream 126166 38404645 ~ 38405464 (+)
G349877 NA other downstream 153700 38432179 ~ 38434024 (+)
G350211 NA other downstream 625251 38903730 ~ 38904774 (+)
G350665 NA other downstream 1109662 39388141 ~ 39389474 (+)

Expression


Co-expression Network