G349528


Basic Information

Item Value
gene id G349528
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38352696 ~ 38362145 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU395475
gttgtagtgtttattaacccatacagtaggttgtaatgtttattcacccatacagtaggttgtaatgtttattcacccatacagtaggttgtaatgtttattcacccatacagtaggttgtaatgtttattcacccatacagtaggttgtagtgtttattcacccatacagtaggttgtagtgtttattcacccatacagtaggttgtaatgtttattcacccatacagtaggttgtaatgtttattcacccatacagtaggttgtaatgtttattcacccatacagtaggttgtaatgtttattcacccatacagtaggttgtaatgtttattcacccatacagtaggttgtaatgtttattcacccatacagtaggttgtagtgtttattcacccatacagtaggttgtagtgtttattcacccatacagtaggttgtagtgtttattcacccatacagtaggttgtagtgtttattcacctatacagtaggttgtagtgtatattcacccatacagtaggttgtaatgtttattcacccatacagtaggttgtagtgtatattcacccatacagtaggttgtagtgtttattcacccatacatacagtatgttctaaTGTTTATtaacccatacatacagtaggttgtagtgtatattcacctatacagtaggttgtagtgtatattcacccatacatacagtatgttct

Function

NR:

description
PREDICTED: agglutinin-like protein 3, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU395475 True 713 lncRNA 0.35 2 38352696 38362145

Neighbor

gene id symbol gene type direction distance location
LOC110522580 LOC106608254 coding upstream 61158 38288197 ~ 38291538 (+)
LOC110521100 LOC106608253 coding upstream 118018 37969722 ~ 38234678 (+)
LOC110522584 LOC106608258 coding upstream 453488 37897636 ~ 37899208 (+)
LOC110521098 LOC106608260 coding upstream 455172 37879402 ~ 37897524 (+)
actc1a LOC105024319 coding upstream 474178 37870752 ~ 37878518 (+)
thbs1b LOC106608163 coding downstream 264071 38626216 ~ 38651062 (+)
LOC110522590 NA coding downstream 455755 38817900 ~ 38820524 (+)
LOC118964474 LOC106608159 coding downstream 463638 38825783 ~ 38885772 (+)
LOC110522591 LOC105024333 coding downstream 528169 38890314 ~ 38897681 (+)
LOC118964476 NA coding downstream 537259 38898435 ~ 38900534 (+)
G349497 NA non-coding upstream 74217 38277459 ~ 38278479 (+)
G349456 NA non-coding upstream 176370 38175489 ~ 38176326 (+)
G349446 NA non-coding upstream 209423 38142289 ~ 38143273 (+)
G349440 NA non-coding upstream 230265 38121386 ~ 38122431 (+)
G349418 NA non-coding upstream 299612 38052576 ~ 38053084 (+)
G349533 NA non-coding downstream 1224 38363369 ~ 38364394 (+)
G349856 NA non-coding downstream 43975 38406120 ~ 38406335 (+)
G349857 NA non-coding downstream 44962 38407107 ~ 38407307 (+)
G349858 NA non-coding downstream 46245 38408390 ~ 38408944 (+)
G349861 NA non-coding downstream 51221 38413366 ~ 38413583 (+)
LOC110522576 LOC106608246 other upstream 855690 37445368 ~ 37501952 (+)
G348133 NA other upstream 1191573 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 2279740 36039096 ~ 36123362 (+)
G347178 NA other upstream 2444245 35908246 ~ 35908451 (+)
G347151 NA other upstream 2518852 35833369 ~ 35833844 (+)
G349855 NA other downstream 42500 38404645 ~ 38405464 (+)
G349877 NA other downstream 70034 38432179 ~ 38434024 (+)
G350211 NA other downstream 541585 38903730 ~ 38904774 (+)
G350665 NA other downstream 1025996 39388141 ~ 39389474 (+)

Expression


Co-expression Network