Gene
RNA
| Item | Value |
|---|---|
| gene id | G349529 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 38353424 ~ 38355731 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU395476 | True | 256 | lncRNA | 0.35 | 2 | 38353424 | 38355731 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522580 | LOC106608254 | coding | upstream | 61886 | 38288197 ~ 38291538 (+) |
| LOC110521100 | LOC106608253 | coding | upstream | 118746 | 37969722 ~ 38234678 (+) |
| LOC110522584 | LOC106608258 | coding | upstream | 454216 | 37897636 ~ 37899208 (+) |
| LOC110521098 | LOC106608260 | coding | upstream | 455900 | 37879402 ~ 37897524 (+) |
| actc1a | LOC105024319 | coding | upstream | 474906 | 37870752 ~ 37878518 (+) |
| thbs1b | LOC106608163 | coding | downstream | 270485 | 38626216 ~ 38651062 (+) |
| LOC110522590 | NA | coding | downstream | 462169 | 38817900 ~ 38820524 (+) |
| LOC118964474 | LOC106608159 | coding | downstream | 470052 | 38825783 ~ 38885772 (+) |
| LOC110522591 | LOC105024333 | coding | downstream | 534583 | 38890314 ~ 38897681 (+) |
| LOC118964476 | NA | coding | downstream | 543673 | 38898435 ~ 38900534 (+) |
| G349497 | NA | non-coding | upstream | 74945 | 38277459 ~ 38278479 (+) |
| G349456 | NA | non-coding | upstream | 177098 | 38175489 ~ 38176326 (+) |
| G349446 | NA | non-coding | upstream | 210151 | 38142289 ~ 38143273 (+) |
| G349440 | NA | non-coding | upstream | 230993 | 38121386 ~ 38122431 (+) |
| G349418 | NA | non-coding | upstream | 300340 | 38052576 ~ 38053084 (+) |
| G349533 | NA | non-coding | downstream | 7638 | 38363369 ~ 38364394 (+) |
| G349856 | NA | non-coding | downstream | 50389 | 38406120 ~ 38406335 (+) |
| G349857 | NA | non-coding | downstream | 51376 | 38407107 ~ 38407307 (+) |
| G349858 | NA | non-coding | downstream | 52659 | 38408390 ~ 38408944 (+) |
| G349861 | NA | non-coding | downstream | 57635 | 38413366 ~ 38413583 (+) |
| LOC110522576 | LOC106608246 | other | upstream | 856418 | 37445368 ~ 37501952 (+) |
| G348133 | NA | other | upstream | 1192301 | 37160094 ~ 37161123 (+) |
| LOC110522562 | LOC105017690 | other | upstream | 2280468 | 36039096 ~ 36123362 (+) |
| G347178 | NA | other | upstream | 2444973 | 35908246 ~ 35908451 (+) |
| G347151 | NA | other | upstream | 2519580 | 35833369 ~ 35833844 (+) |
| G349855 | NA | other | downstream | 48914 | 38404645 ~ 38405464 (+) |
| G349877 | NA | other | downstream | 76448 | 38432179 ~ 38434024 (+) |
| G350211 | NA | other | downstream | 547999 | 38903730 ~ 38904774 (+) |
| G350665 | NA | other | downstream | 1032410 | 39388141 ~ 39389474 (+) |
