G349531


Basic Information

Item Value
gene id G349531
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 38354868 ~ 38363027 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU395479
ggttgtagtgtttattaacccatacagtaggttgtagtgtttattcacccatacatacagtaggttgtagtgtttattaacccatacagtaggttgtagtgtttattcacccatacagtaggttgtagtgtttattcacccatacagtaggttgtagtgtttattaacccatacagtaggttgtaatgtttattcacccatacagtaggttgtagtgtttattcacccatacatatagtaggttgtagtgtttattcacccatacatacagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU395479 True 272 lncRNA 0.36 2 38354868 38363027

Neighbor

gene id symbol gene type direction distance location
LOC110522580 LOC106608254 coding upstream 63330 38288197 ~ 38291538 (+)
LOC110521100 LOC106608253 coding upstream 120190 37969722 ~ 38234678 (+)
LOC110522584 LOC106608258 coding upstream 455660 37897636 ~ 37899208 (+)
LOC110521098 LOC106608260 coding upstream 457344 37879402 ~ 37897524 (+)
actc1a LOC105024319 coding upstream 476350 37870752 ~ 37878518 (+)
thbs1b LOC106608163 coding downstream 263189 38626216 ~ 38651062 (+)
LOC110522590 NA coding downstream 454873 38817900 ~ 38820524 (+)
LOC118964474 LOC106608159 coding downstream 462756 38825783 ~ 38885772 (+)
LOC110522591 LOC105024333 coding downstream 527287 38890314 ~ 38897681 (+)
LOC118964476 NA coding downstream 536377 38898435 ~ 38900534 (+)
G349497 NA non-coding upstream 76389 38277459 ~ 38278479 (+)
G349456 NA non-coding upstream 178542 38175489 ~ 38176326 (+)
G349446 NA non-coding upstream 211595 38142289 ~ 38143273 (+)
G349440 NA non-coding upstream 232437 38121386 ~ 38122431 (+)
G349418 NA non-coding upstream 301784 38052576 ~ 38053084 (+)
G349533 NA non-coding downstream 342 38363369 ~ 38364394 (+)
G349856 NA non-coding downstream 43093 38406120 ~ 38406335 (+)
G349857 NA non-coding downstream 44080 38407107 ~ 38407307 (+)
G349858 NA non-coding downstream 45363 38408390 ~ 38408944 (+)
G349861 NA non-coding downstream 50339 38413366 ~ 38413583 (+)
LOC110522576 LOC106608246 other upstream 857862 37445368 ~ 37501952 (+)
G348133 NA other upstream 1193745 37160094 ~ 37161123 (+)
LOC110522562 LOC105017690 other upstream 2281912 36039096 ~ 36123362 (+)
G347178 NA other upstream 2446417 35908246 ~ 35908451 (+)
G347151 NA other upstream 2521024 35833369 ~ 35833844 (+)
G349855 NA other downstream 41618 38404645 ~ 38405464 (+)
G349877 NA other downstream 69152 38432179 ~ 38434024 (+)
G350211 NA other downstream 540703 38903730 ~ 38904774 (+)
G350665 NA other downstream 1025114 39388141 ~ 39389474 (+)

Expression


Co-expression Network